PDB entry 5ygh
View 5ygh on RCSB PDB site
Description: Crystal Structure of the Capsid Protein from Zika Virus
Class: viral protein
Keywords: Zika virus, capsid (C), RNA binding protein, virus assembly, VIRAL PROTEIN
Deposited on
2017-09-23, released
2018-02-28
The last revision prior to the SCOPe 2.07 freeze date was dated
2018-04-04, with a file datestamp of
2018-03-29.
Experiment type: XRAY
Resolution: 1.88 Å
R-factor: N/A
AEROSPACI score: 0.35
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: capsid protein
Species: Zika virus (strain Mr 766) [TaxId:64320]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5ygha_ - Chain 'B':
Compound: capsid protein
Species: Zika virus (strain Mr 766) [TaxId:64320]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5yghb_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5yghA (A:)
rvspfgglkrlpaglllghgpirmvlailaflrftaikpslglinrwgsvgkkeameiik
kfkkdlaamlriinar
Sequence, based on observed residues (ATOM records): (download)
>5yghA (A:)
pfgglkrlpaglllghgpirmvlailaflrftaikpslglinrwgsvgkkeameiikkfk
kdlaamlriinar
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5yghB (B:)
rvspfgglkrlpaglllghgpirmvlailaflrftaikpslglinrwgsvgkkeameiik
kfkkdlaamlriinar
Sequence, based on observed residues (ATOM records): (download)
>5yghB (B:)
pfgglkrlpaglllghgpirmvlailaflrftaikpslglinrwgsvgkkeameiikkfk
kdlaamlriinar