PDB entry 5yd7

View 5yd7 on RCSB PDB site
Description: Crystal Structure OF VIM-2 Metallo-beta-lactamase
Class: hydrolase
Keywords: hydrolase
Deposited on 2017-09-11, released 2018-09-19
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-09-19, with a file datestamp of 2018-09-14.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: beta-lactamase class b vim-2
    Species: Pseudomonas aeruginosa [TaxId:287]
    Gene: blaVIM-2, bla vim-2, bla-VIM-2, blasVIM-2, blaVIM2, blm, VIM-2, vim-2, PAERUG_P32_London_17_VIM_2_10_11_06255
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5yd7a_
  • Chain 'B':
    Compound: beta-lactamase class b vim-2
    Species: Pseudomonas aeruginosa [TaxId:287]
    Gene: blaVIM-2, bla vim-2, bla-VIM-2, blasVIM-2, blaVIM2, blm, VIM-2, vim-2, PAERUG_P32_London_17_VIM_2_10_11_06255
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5yd7b_
  • Heterogens: ZN, FMT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5yd7A (A:)
splafsvdssgeyptvseipvgevrlyqiadgvwshiatqsfdgavypsnglivrdgdel
llidtawgakntaallaeiekqiglpvtravsthfhddrvggvdvlraagvatyaspstr
rlaevegneipthsleglsssgdavrfgpvelfypgaahstdnlvvyvpsasvlyggcai
yelsrtsagnvadadlaewptsieriqqhypeaqfvipghglpggldllkhttnvvkaht
nrsvve

    Sequence, based on observed residues (ATOM records): (download) 
    >5yd7A (A:)
eyptvseipvgevrlyqiadgvwshiatqsfdgavypsnglivrdgdelllidtawgakn
taallaeiekqiglpvtravsthfhddrvggvdvlraagvatyaspstrrlaevegneip
thsleglsssgdavrfgpvelfypgaahstdnlvvyvpsasvlyggcaiyelsrtsagnv
adadlaewptsieriqqhypeaqfvipghglpggldllkhttnvvkahtnr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5yd7B (B:)
splafsvdssgeyptvseipvgevrlyqiadgvwshiatqsfdgavypsnglivrdgdel
llidtawgakntaallaeiekqiglpvtravsthfhddrvggvdvlraagvatyaspstr
rlaevegneipthsleglsssgdavrfgpvelfypgaahstdnlvvyvpsasvlyggcai
yelsrtsagnvadadlaewptsieriqqhypeaqfvipghglpggldllkhttnvvkaht
nrsvve

    Sequence, based on observed residues (ATOM records): (download) 
    >5yd7B (B:)
eyptvseipvgevrlyqiadgvwshiatqsfdgavypsnglivrdgdelllidtawgakn
taallaeiekqiglpvtravsthfhddrvggvdvlraagvatyaspstrrlaevegneip
thsleglsssgdavrfgpvelfypgaahstdnlvvyvpsasvlyggcaiyelsrtsagnv
adadlaewptsieriqqhypeaqfvipghglpggldllkhttnvvkahtnr