PDB entry 5ycb
View 5ycb on RCSB PDB site
Description: Crystal structure of notothenia coriiceps adenylate kinase variant
Class: transferase
Keywords: phosphorylation, TRANSFERASE
Deposited on
2017-09-07, released
2018-09-12
The last revision prior to the SCOPe 2.08 freeze date was dated
2018-09-19, with a file datestamp of
2018-09-14.
Experiment type: XRAY
Resolution: 2.27 Å
R-factor: N/A
AEROSPACI score: 0.26
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: adenylate kinase
Species: Notothenia coriiceps [TaxId:8208]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5ycba_ - Chain 'B':
Compound: adenylate kinase
Species: Notothenia coriiceps [TaxId:8208]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5ycbb_ - Heterogens: AP5, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5ycbA (A:)
madkikdakiifvvggpgsgkgtqcekvvakygythlssgdllraevssgsergkqlqai
mqkgelvpldtvldmikdamiakadvskgylidgyprevkqgeefekkigkpclllyida
kgetmvkrlmkrgetsgraddneetikkrldlyykatepviafyegrgivrkidselpvd
evfkqvstaidal
Sequence, based on observed residues (ATOM records): (download)
>5ycbA (A:)
ikdakiifvvggpgsgkgtqcekvvakygythlssgdllraevssgsergkqlqaimqkg
elvpldtvldmikdamiakadvskgylidgyprevkqgeefekkigkpclllyidakget
mvkrlmkrgetsgraddneetikkrldlyykatepviafyegrgivrkidselpvdevfk
qvstaidal
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5ycbB (B:)
madkikdakiifvvggpgsgkgtqcekvvakygythlssgdllraevssgsergkqlqai
mqkgelvpldtvldmikdamiakadvskgylidgyprevkqgeefekkigkpclllyida
kgetmvkrlmkrgetsgraddneetikkrldlyykatepviafyegrgivrkidselpvd
evfkqvstaidal
Sequence, based on observed residues (ATOM records): (download)
>5ycbB (B:)
akiifvvggpgsgkgtqcekvvakygythlssgdllraevssgsergkqlqaimqkgelv
pldtvldmikdamiakadvskgylidgyprevkqgeefekkigkpclllyidakgetmvk
rlmkrgetsgraddneetikkrldlyykatepviafyegrgivrkidselpvdevfkqvs
taidal