PDB entry 5y9z
View 5y9z on RCSB PDB site
Description: Crystal structure of rat hematopoietic prostaglandin D synthase
Class: transferase
Keywords: prostaglandin D synthase, TRANSFERASE
Deposited on
2017-08-29, released
2018-09-19
The last revision prior to the SCOPe 2.08 freeze date was dated
2018-09-19, with a file datestamp of
2018-09-14.
Experiment type: XRAY
Resolution: 1.09 Å
R-factor: N/A
AEROSPACI score: 0.74
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: hematopoietic prostaglandin d synthase
Species: Rattus norvegicus [TaxId:10116]
Gene: HPGDS, GSTS, PGDS, PTGDS2
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5y9za1, d5y9za2 - Chain 'B':
Compound: hematopoietic prostaglandin d synthase
Species: Rattus norvegicus [TaxId:10116]
Gene: HPGDS, GSTS, PGDS, PTGDS2
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5y9zb1, d5y9zb2 - Heterogens: GSH, MG, DIO, EDO, GOL, PGE, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5y9zA (A:)
mpnykllyfnmrgraeiiryifayldikyedhrieqadwpkikptlpfgkipvleveglt
lhqslaiaryltkntdlagkteleqcqvdavvdtlddfmslfpwaeenqdlkertfndll
trqaphllkdldtylgdkewfignyvtwadfywdicsttllvlkpdllgiyprlvslrnk
vqaipaisawilkrpqtkl
Sequence, based on observed residues (ATOM records): (download)
>5y9zA (A:)
pnykllyfnmrgraeiiryifayldikyedhrieqadwpkikptlpfgkipvlevegltl
hqslaiaryltkntdlagkteleqcqvdavvdtlddfmslfpwaeenqdlkertfndllt
rqaphllkdldtylgdkewfignyvtwadfywdicsttllvlkpdllgiyprlvslrnkv
qaipaisawilkrpqtkl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5y9zB (B:)
mpnykllyfnmrgraeiiryifayldikyedhrieqadwpkikptlpfgkipvleveglt
lhqslaiaryltkntdlagkteleqcqvdavvdtlddfmslfpwaeenqdlkertfndll
trqaphllkdldtylgdkewfignyvtwadfywdicsttllvlkpdllgiyprlvslrnk
vqaipaisawilkrpqtkl
Sequence, based on observed residues (ATOM records): (download)
>5y9zB (B:)
pnykllyfnmrgraeiiryifayldikyedhrieqadwpkikptlpfgkipvlevegltl
hqslaiaryltkntdlagkteleqcqvdavvdtlddfmslfpwaeenqdlkertfndllt
rqaphllkdldtylgdkewfignyvtwadfywdicsttllvlkpdllgiyprlvslrnkv
qaipaisawilkrpqtkl