PDB entry 5y26

View 5y26 on RCSB PDB site
Description: Crystal structure of native Dpb4-Dpb3
Class: DNA binding protein
Keywords: Heterodimer, Histone fold complex, DNA binding, Epigenetic, DNA BINDING PROTEIN
Deposited on 2017-07-24, released 2018-01-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-01-24, with a file datestamp of 2018-01-19.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase epsilon subunit D
    Species: Schizosaccharomyces pombe (strain 972 / ATCC 24843) [TaxId:284812]
    Gene: dpb4, SPBC3D6.09
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5y26a_
  • Chain 'B':
    Compound: Putative transcription factor C16C4.22
    Species: Schizosaccharomyces pombe (strain 972 / ATCC 24843) [TaxId:284812]
    Gene: SPCC16C4.22
    Database cross-references and differences (RAF-indexed):
    • Uniprot C6Y4D0 (5-91)
      • expression tag (0-4)
    Domains in SCOPe 2.08: d5y26b1, d5y26b2
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5y26A (A:)
mgnqdksketselddlalprsiimrlvkgvlpekslvqkealkaminsatlfvsfltsas
geiatnnnrkilmpqdvlnaldeieypefsktlkkhleayelalkekrlklpnvsdvdnr
kkakidahdttpldeekdeleeeriaediaqneveqniddvedleevndtldanaespqi
etihltdatgnpiedssesdseeslqlndssaaaenlyfqgledykddddkhhhhhhhhh
h

    Sequence, based on observed residues (ATOM records): (download) 
    >5y26A (A:)
tselddlalprsiimrlvkgvlpekslvqkealkaminsatlfvsfltsasgeiatnnnr
kilmpqdvlnaldeieypefsktlkkhleayelalke

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5y26B (B:)
gplgsmektygktvlplsrvkriikqdedvhycsnasallisvatelfveklateayqla
klqkrkgiryrdvedvvrkddqfeflsdlfsi