PDB entry 5y1f

View 5y1f on RCSB PDB site
Description: Monomeric L-threonine 3-dehydrogenase from metagenome database (NAD+ bound form)
Class: oxidoreductase
Keywords: dehydrogenase, NAD+, OXIDOREDUCTASE
Deposited on 2017-07-20, released 2017-11-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-15, with a file datestamp of 2017-11-10.
Experiment type: XRAY
Resolution: 1.25 Å
R-factor: N/A
AEROSPACI score: 0.61 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: NAD dependent epimerase/dehydratase family
    Species: uncultured archaeon MedDCM-OCT-S05-C57 [TaxId:743092]
    Database cross-references and differences (RAF-indexed):
    • Uniprot D6PBM7 (20-327)
      • expression tag (17-19)
    Domains in SCOPe 2.08: d5y1fa1, d5y1fa2
  • Heterogens: NAD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5y1fA (A:)
mgsshhhhhhssglvprgshmilvtgalgqigtelvlalqekygndkiiasdlkepenyh
ckfekcdirdietyerinnenkieivyhlaailsaageknpelchdvnynglenvlktak
kynqklfcpssiavfgpdvpkemtpqnvelnpktvygitkvkgeelcdtyfkehgidvrg
irypgliswkhkpsggttdyavemyfdavesgkyecfvnrntrlpmmfmddairatlelm
dapldslnyhsnynlssmsfsaeelekeisahvdfnclykpdyrqdiadtwpisinddda
rkdwgwepkfdiskmteemitnlrrlne

    Sequence, based on observed residues (ATOM records): (download) 
    >5y1fA (A:)
gshmilvtgalgqigtelvlalqekygndkiiasdlkepenyhckfekcdirdietyeri
nnenkieivyhlaailsaageknpelchdvnynglenvlktakkynqklfcpssiavfgp
dvpkemtpqnvelnpktvygitkvkgeelcdtyfkehgidvrgirypgliswkhkpsggt
tdyavemyfdavesgkyecfvnrntrlpmmfmddairatlelmdapldslnyhsnynlss
msfsaeelekeisahvdfnclykpdyrqdiadtwpisindddarkdwgwepkfdiskmte
emitnlrrlne