PDB entry 5xmp
View 5xmp on RCSB PDB site
Description: Plasmodium vivax SHMT(C346A) bound with PLP-glycine and MF057
Class: transferase/transferase inhibitor
Keywords: alpha and beta protein, methyltransferase activity, TRANSFERASE-TRANSFERASE INHIBITOR complex
Deposited on
2017-05-16, released
2017-11-29
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-11-29, with a file datestamp of
2017-11-24.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.22
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: serine hydroxymethyltransferase
Species: Plasmodium vivax [TaxId:5855]
Gene: PVC01_140059500, PVP01_1453700, PVT01_140059000
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1G4H5I1 (0-441)
- engineered mutation (363)
Domains in SCOPe 2.07: d5xmpa_ - Chain 'B':
Compound: serine hydroxymethyltransferase
Species: Plasmodium vivax [TaxId:5855]
Gene: PVC01_140059500, PVP01_1453700, PVT01_140059000
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1G4H5I1 (0-441)
- engineered mutation (363)
Domains in SCOPe 2.07: d5xmpb_ - Chain 'C':
Compound: serine hydroxymethyltransferase
Species: Plasmodium vivax [TaxId:5855]
Gene: PVC01_140059500, PVP01_1453700, PVT01_140059000
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1G4H5I1 (0-441)
- engineered mutation (363)
Domains in SCOPe 2.07: d5xmpc_ - Heterogens: PLG, 8A3, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>5xmpA (A:)
mfnnepleqidkelhdiladeekrqretinliasenltngavreclgnrvsnkysegypk
kryyggndfidkieelcqkraleafnvsdeewgvnvqplsgsaanvqalyalvgvkgkim
gmhlcsgghlthgffdekkkvsitsdmfesklykcnsqgyvdldavremalsfkpkviic
gytsyprdidyqqfrqicdevnaylfadishissfvacnilnnpflhadvvtttthkilr
gprsaliffnkkrnpgieqkinsavfpsfqggphnnkiaavacqlkevhspafkeytqqv
llnskalakaliskqidlvtngtdnhlivvdlrkfsitgsklqetcnainvslnkntips
dvdavspsgvrigtpamttrgakekdmefiadvlaraikitvdlqeqygkklvdfkkglp
gnaqlqqlkqevvtwagalpfp
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>5xmpB (B:)
mfnnepleqidkelhdiladeekrqretinliasenltngavreclgnrvsnkysegypk
kryyggndfidkieelcqkraleafnvsdeewgvnvqplsgsaanvqalyalvgvkgkim
gmhlcsgghlthgffdekkkvsitsdmfesklykcnsqgyvdldavremalsfkpkviic
gytsyprdidyqqfrqicdevnaylfadishissfvacnilnnpflhadvvtttthkilr
gprsaliffnkkrnpgieqkinsavfpsfqggphnnkiaavacqlkevhspafkeytqqv
llnskalakaliskqidlvtngtdnhlivvdlrkfsitgsklqetcnainvslnkntips
dvdavspsgvrigtpamttrgakekdmefiadvlaraikitvdlqeqygkklvdfkkglp
gnaqlqqlkqevvtwagalpfp
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>5xmpC (C:)
mfnnepleqidkelhdiladeekrqretinliasenltngavreclgnrvsnkysegypk
kryyggndfidkieelcqkraleafnvsdeewgvnvqplsgsaanvqalyalvgvkgkim
gmhlcsgghlthgffdekkkvsitsdmfesklykcnsqgyvdldavremalsfkpkviic
gytsyprdidyqqfrqicdevnaylfadishissfvacnilnnpflhadvvtttthkilr
gprsaliffnkkrnpgieqkinsavfpsfqggphnnkiaavacqlkevhspafkeytqqv
llnskalakaliskqidlvtngtdnhlivvdlrkfsitgsklqetcnainvslnkntips
dvdavspsgvrigtpamttrgakekdmefiadvlaraikitvdlqeqygkklvdfkkglp
gnaqlqqlkqevvtwagalpfp