PDB entry 5xk3

View 5xk3 on RCSB PDB site
Description: Crystal structure of apo form Isosesquilavandulyl Diphosphate Synthase from Streptomyces sp. strain CNH-189
Class: transferase
Keywords: prenyltransferase, antibiotic biosynthesis, TRANSFERASE
Deposited on 2017-05-05, released 2018-01-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-01-24, with a file datestamp of 2018-01-19.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Undecaprenyl diphosphate synthase
    Species: Streptomyces sp. CNH189 [TaxId:1136432]
    Gene: mcl22
    Database cross-references and differences (RAF-indexed):
    • Uniprot M4T4U9 (15-End)
      • expression tag (14)
    Domains in SCOPe 2.08: d5xk3a1, d5xk3a2
  • Chain 'B':
    Compound: Undecaprenyl diphosphate synthase
    Species: Streptomyces sp. CNH189 [TaxId:1136432]
    Gene: mcl22
    Database cross-references and differences (RAF-indexed):
    • Uniprot M4T4U9 (15-End)
      • expression tag (14)
    Domains in SCOPe 2.08: d5xk3b1, d5xk3b2
  • Chain 'C':
    Compound: Undecaprenyl diphosphate synthase
    Species: Streptomyces sp. CNH189 [TaxId:1136432]
    Gene: mcl22
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5xk3c_
  • Chain 'D':
    Compound: Undecaprenyl diphosphate synthase
    Species: Streptomyces sp. CNH189 [TaxId:1136432]
    Gene: mcl22
    Database cross-references and differences (RAF-indexed):
    • Uniprot M4T4U9 (15-End)
      • expression tag (14)
    Domains in SCOPe 2.08: d5xk3d1, d5xk3d2
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5xk3A (A:)
mahhhhhhvddddkmmtnlmllpdgmrrwsqkqgislddsyaamtdklveftgwareegf
ttfyvtvssvanysrseeqvttamnaftevvrrchdtlnfnysgtlevvperwlteleal
raksdsqsdftlhfimgmslahevigifnkfngkipalteellaanayvpepvdflirpg
ghvrmssfyplmspfaemyfcptllndmtradfdvaledlrerdrryglypv

    Sequence, based on observed residues (ATOM records): (download) 
    >5xk3A (A:)
mmtnlmllpdgmrrwsqkqgislddsyaamtdklveftgwareegfttfyvtvssvanys
rseeqvttamnaftevvrrchdtlnfnysgtlevvperwltelealraksdsqsdftlhf
imgmslahevigifnkfngkipalteellaanayvpepvdflirpgghvrmssfyplmsp
faemyfcptllndmtradfdvaledlrerdrryglyp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5xk3B (B:)
mahhhhhhvddddkmmtnlmllpdgmrrwsqkqgislddsyaamtdklveftgwareegf
ttfyvtvssvanysrseeqvttamnaftevvrrchdtlnfnysgtlevvperwlteleal
raksdsqsdftlhfimgmslahevigifnkfngkipalteellaanayvpepvdflirpg
ghvrmssfyplmspfaemyfcptllndmtradfdvaledlrerdrryglypv

    Sequence, based on observed residues (ATOM records): (download) 
    >5xk3B (B:)
mmtnlmllpdgmrrwsqkqgislddsyaamtdklveftgwareegfttfyvtvssvanys
rseeqvttamnaftevvrrchdtlnfnysgtlevvperwltelealraksdsqsdftlhf
imgmslahevigifnkfngkipalteellaanayvpepvdflirpgghvrmssfyplmsp
faemyfcptllndmtradfdvaledlrerd

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5xk3C (C:)
mahhhhhhvddddkmmtnlmllpdgmrrwsqkqgislddsyaamtdklveftgwareegf
ttfyvtvssvanysrseeqvttamnaftevvrrchdtlnfnysgtlevvperwlteleal
raksdsqsdftlhfimgmslahevigifnkfngkipalteellaanayvpepvdflirpg
ghvrmssfyplmspfaemyfcptllndmtradfdvaledlrerdrryglypv

    Sequence, based on observed residues (ATOM records): (download) 
    >5xk3C (C:)
mtnlmllpdgmrrwsqkqgislddsyaamtdklveftgwareegfttfyvtvssvanysr
seeqvttamnaftevvrrchdtlnfnysgtlevvperwltelealraksdsqsdftlhfi
mgmslahevigifnkfngkipalteellaanayvpepvdflirpgghvrmssfyplmspf
aemyfcptllndmtradfdvaledlrerdrryglyp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5xk3D (D:)
mahhhhhhvddddkmmtnlmllpdgmrrwsqkqgislddsyaamtdklveftgwareegf
ttfyvtvssvanysrseeqvttamnaftevvrrchdtlnfnysgtlevvperwlteleal
raksdsqsdftlhfimgmslahevigifnkfngkipalteellaanayvpepvdflirpg
ghvrmssfyplmspfaemyfcptllndmtradfdvaledlrerdrryglypv

    Sequence, based on observed residues (ATOM records): (download) 
    >5xk3D (D:)
mmtnlmllpdgmrrwsqkqgislddsyaamtdklveftgwareegfttfyvtvssvanys
rseeqvttamnaftevvrrchdtlnfnysgtlevvperwltelealraksdsqsdftlhf
imgmslahevigifnkfngkipalteellaanayvpepvdflirpgghvrmssfyplmsp
faemyfcptllndmtradfdvaledlrerd