PDB entry 5xin

View 5xin on RCSB PDB site
Description: protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1. crystallography and site-directed mutagenesis of metal binding sites
Class: isomerase(intramolecular oxidoreductse)
Keywords: isomerase(intramolecular oxidoreductse)
Deposited on 1992-04-06, released 1993-07-15
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.152
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: d-xylose isomerase
    Species: Actinoplanes missouriensis [TaxId:1866]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12851 (Start-392)
      • conflict (253)
    Domains in SCOPe 2.07: d5xina_
  • Chain 'B':
    Compound: d-xylose isomerase
    Species: Actinoplanes missouriensis [TaxId:1866]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12851 (Start-392)
      • conflict (253)
    Domains in SCOPe 2.07: d5xinb_
  • Chain 'C':
    Compound: d-xylose isomerase
    Species: Actinoplanes missouriensis [TaxId:1866]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12851 (Start-392)
      • conflict (253)
    Domains in SCOPe 2.07: d5xinc_
  • Chain 'D':
    Compound: d-xylose isomerase
    Species: Actinoplanes missouriensis [TaxId:1866]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12851 (Start-392)
      • conflict (253)
    Domains in SCOPe 2.07: d5xind_
  • Heterogens: XLS, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5xinA (A:)
svqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpf
gsdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlr
qmdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaie
pkpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkkl
fhidlngqhgpkfaqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedy
dgvwesakanirmylllkerakafradpevqealaaskvaelktptlnpgegyaelladr
safedydadavgakgfgfvklnqlaiehllgar

    Sequence, based on observed residues (ATOM records): (download) 
    >5xinA (A:)
vqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpfg
sdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlrq
mdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaiep
kpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkklf
hidlngqhgpkfaqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedyd
gvwesakanirmylllkerakafradpevqealaaskvaelktptlnpgegyaelladrs
afedydadavgakgfgfvklnqlaiehllgar

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5xinB (B:)
svqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpf
gsdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlr
qmdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaie
pkpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkkl
fhidlngqhgpkfaqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedy
dgvwesakanirmylllkerakafradpevqealaaskvaelktptlnpgegyaelladr
safedydadavgakgfgfvklnqlaiehllgar

    Sequence, based on observed residues (ATOM records): (download) 
    >5xinB (B:)
vqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpfg
sdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlrq
mdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaiep
kpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkklf
hidlngqhgpkfaqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedyd
gvwesakanirmylllkerakafradpevqealaaskvaelktptlnpgegyaelladrs
afedydadavgakgfgfvklnqlaiehllgar

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5xinC (C:)
svqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpf
gsdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlr
qmdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaie
pkpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkkl
fhidlngqhgpkfaqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedy
dgvwesakanirmylllkerakafradpevqealaaskvaelktptlnpgegyaelladr
safedydadavgakgfgfvklnqlaiehllgar

    Sequence, based on observed residues (ATOM records): (download) 
    >5xinC (C:)
vqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpfg
sdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlrq
mdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaiep
kpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkklf
hidlngqhgpkfaqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedyd
gvwesakanirmylllkerakafradpevqealaaskvaelktptlnpgegyaelladrs
afedydadavgakgfgfvklnqlaiehllgar

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5xinD (D:)
svqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpf
gsdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlr
qmdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaie
pkpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkkl
fhidlngqhgpkfaqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedy
dgvwesakanirmylllkerakafradpevqealaaskvaelktptlnpgegyaelladr
safedydadavgakgfgfvklnqlaiehllgar

    Sequence, based on observed residues (ATOM records): (download) 
    >5xinD (D:)
vqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpfg
sdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlrq
mdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaiep
kpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkklf
hidlngqhgpkfaqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedyd
gvwesakanirmylllkerakafradpevqealaaskvaelktptlnpgegyaelladrs
afedydadavgakgfgfvklnqlaiehllgar