PDB entry 5wtp

View 5wtp on RCSB PDB site
Description: Crystal structure of the C-terminal domain of outer membrane protein A (OmpA) from Capnocytophaga gingivalis
Class: membrane protein
Keywords: prokaryote, TT3R, TSP, calcium-binding motif, MEMBRANE PROTEIN
Deposited on 2016-12-13, released 2017-12-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-09-12, with a file datestamp of 2018-09-07.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: OmpA family protein
    Species: Capnocytophaga gingivalis [TaxId:553178]
    Gene: CAPGI0001_0903
    Database cross-references and differences (RAF-indexed):
    • Uniprot C2M2E7 (4-End)
      • expression tag (0-3)
    Domains in SCOPe 2.08: d5wtpa1, d5wtpa2
  • Chain 'B':
    Compound: OmpA family protein
    Species: Capnocytophaga gingivalis [TaxId:553178]
    Gene: CAPGI0001_0903
    Database cross-references and differences (RAF-indexed):
    • Uniprot C2M2E7 (4-End)
      • expression tag (3)
    Domains in SCOPe 2.08: d5wtpb1, d5wtpb2
  • Chain 'C':
    Compound: OmpA family protein
    Species: Capnocytophaga gingivalis [TaxId:553178]
    Gene: CAPGI0001_0903
    Database cross-references and differences (RAF-indexed):
    • Uniprot C2M2E7 (4-End)
      • expression tag (2-3)
    Domains in SCOPe 2.08: d5wtpc1, d5wtpc2
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5wtpA (A:)
gsefepdekeqkqlnqyaktilfdtgkatikfqsaevlnqiinvlkkypnsrfrieghtd
stgkkaknmilsqnradavkvyliqggidagrlesqgfgpekpiasnknkkgrelnrrve
inlik

    Sequence, based on observed residues (ATOM records): (download) 
    >5wtpA (A:)
gsefepdekeqkqlnqyaktilfdtgkatikfqsaevlnqiinvlkkypnsrfrieghtd
stgkkaknmilsqnradavkvyliqggidagrlesqgfgpekpiasnknkkgrelnrrve
inli

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5wtpB (B:)
gsefepdekeqkqlnqyaktilfdtgkatikfqsaevlnqiinvlkkypnsrfrieghtd
stgkkaknmilsqnradavkvyliqggidagrlesqgfgpekpiasnknkkgrelnrrve
inlik

    Sequence, based on observed residues (ATOM records): (download) 
    >5wtpB (B:)
fepdekeqkqlnqyaktilfdtgkatikfqsaevlnqiinvlkkypnsrfrieghtdstg
kkaknmilsqnradavkvyliqggidagrlesqgfgpekpiasnknkkgrelnrrveinl
i

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5wtpC (C:)
gsefepdekeqkqlnqyaktilfdtgkatikfqsaevlnqiinvlkkypnsrfrieghtd
stgkkaknmilsqnradavkvyliqggidagrlesqgfgpekpiasnknkkgrelnrrve
inlik

    Sequence, based on observed residues (ATOM records): (download) 
    >5wtpC (C:)
efepdekeqkqlnqyaktilfdtgkatikfqsaevlnqiinvlkkypnsrfrieghtdst
gkkaknmilsqnradavkvyliqggidagrlesqgfgpekpiasnknkkgrelnrrvein
li