PDB entry 5wkc

View 5wkc on RCSB PDB site
Description: Saccharomyces cerevisiae acetohydroxyacid synthase in complex with the herbicide penoxsulam
Class: STRUCTURAL PROTEIN,Transferase
Keywords: AHAS, acetohydroxyacid synthase; ScAHAS; thiamine diphosphate; flavin adenine dinucleotide; penoxsulam; aminoethenethiol diphosphate; peracetate., STRUCTURAL PROTEIN, Transferase
Deposited on 2017-07-25, released 2018-02-14
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-08, with a file datestamp of 2020-01-03.
Experiment type: XRAY
Resolution: 2.33 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Acetolactate synthase catalytic subunit, mitochondrial
    Species: Saccharomyces cerevisiae S288c [TaxId:559292]
    Gene: ILV2, SMR1, YMR108W, YM9718.07
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5wkca1, d5wkca2, d5wkca3
  • Chain 'B':
    Compound: Acetolactate synthase catalytic subunit, mitochondrial
    Species: Saccharomyces cerevisiae S288c [TaxId:559292]
    Gene: ILV2, SMR1, YMR108W, YM9718.07
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5wkcb1, d5wkcb2, d5wkcb3
  • Chain 'D':
    Compound: Acetolactate synthase catalytic subunit, mitochondrial
    Species: Saccharomyces cerevisiae S288c [TaxId:559292]
    Gene: ILV2, SMR1, YMR108W, YM9718.07
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5wkcd1, d5wkcd2, d5wkcd3
  • Chain 'E':
    Compound: Acetolactate synthase catalytic subunit, mitochondrial
    Species: Saccharomyces cerevisiae S288c [TaxId:559292]
    Gene: ILV2, SMR1, YMR108W, YM9718.07
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5wkce1, d5wkce2, d5wkce3
  • Heterogens: MG, PXD, FAD, F50, AUJ, TP9, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5wkcA (A:)
mhhhhhhssglvprgsgmketaaakferqhmdspdlgtddddkamgsapsfnvdpleqpa
epsklakklraepdmdtsfvgltggqifnemmsrqnvdtvfgypggailpvydaihnsdk
fnfvlpkheqgaghmaegyarasgkpgvvlvtsgpgatnvvtpmadafadgipmvvftgq
vptsaigtdafqeadvvgisrsctkwnvmvksveelplrineafeiatsgrpgpvlvdlp
kdvtaailrnpiptkttlpsnalnqltsraqdefvmqsinkaadlinlakkpvlyvgagi
lnhadgprllkelsdraqipvtttlqglgsfdqedpksldmlgmhgcatanlavqnadli
iavgarfddrvtgniskfapearraaaegrggiihfevspkninkvvqtqiavegdattn
lgkmmskifpvkersewfaqinkwkkeypyaymeetpgskikpqtvikklskvandtgrh
vivttgvgqhqmwaaqhwtwrnphtfitsgglgtmgyglpaaigaqvakpeslvididgd
asfnmtltelssavqagtpvkililnneeqgmvtqwqslfyehryshthqlnpdfiklae
amglkglrvkkqeeldaklkefvstkgpvllevevdkkvpvlpmvaggsgldefinfdpe
verqqtelrhkrtggkh

    Sequence, based on observed residues (ATOM records): (download) 
    >5wkcA (A:)
mdtsfvgltggqifnemmsrqnvdtvfgypggailpvydaihnsdkfnfvlpkheqgagh
maegyarasgkpgvvlvtsgpgatnvvtpmadafadgipmvvftgqvptsaigtdafqea
dvvgisrsctkwnvmvksveelplrineafeiatsgrpgpvlvdlpkdvtaailrnpipt
kttaqdefvmqsinkaadlinlakkpvlyvgagilnhadgprllkelsdraqipvtttlq
glgsfdqedpksldmlgmhgcatanlavqnadliiavgarfddrvtgniskfapearraa
aegrggiihfevspkninkvvqtqiavegdattnlgkmmskifpvkersewfaqinkwkk
eypyaymeetpgskikpqtvikklskvandtgrhvivttgvgqhqmwaaqhwtwrnphtf
itsgglgtmgyglpaaigaqvakpeslvididgdasfnmtltelssavqagtpvkililn
neeqgmvtqwqslfyehryshthqlnpdfiklaeamglkglrvkkqeeldaklkefvstk
gpvllevevdkkvpvlpmvaggsgldefinfdpeverqqtelrhkrtggkh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5wkcB (B:)
mhhhhhhssglvprgsgmketaaakferqhmdspdlgtddddkamgsapsfnvdpleqpa
epsklakklraepdmdtsfvgltggqifnemmsrqnvdtvfgypggailpvydaihnsdk
fnfvlpkheqgaghmaegyarasgkpgvvlvtsgpgatnvvtpmadafadgipmvvftgq
vptsaigtdafqeadvvgisrsctkwnvmvksveelplrineafeiatsgrpgpvlvdlp
kdvtaailrnpiptkttlpsnalnqltsraqdefvmqsinkaadlinlakkpvlyvgagi
lnhadgprllkelsdraqipvtttlqglgsfdqedpksldmlgmhgcatanlavqnadli
iavgarfddrvtgniskfapearraaaegrggiihfevspkninkvvqtqiavegdattn
lgkmmskifpvkersewfaqinkwkkeypyaymeetpgskikpqtvikklskvandtgrh
vivttgvgqhqmwaaqhwtwrnphtfitsgglgtmgyglpaaigaqvakpeslvididgd
asfnmtltelssavqagtpvkililnneeqgmvtqwqslfyehryshthqlnpdfiklae
amglkglrvkkqeeldaklkefvstkgpvllevevdkkvpvlpmvaggsgldefinfdpe
verqqtelrhkrtggkh

    Sequence, based on observed residues (ATOM records): (download) 
    >5wkcB (B:)
pdmdtsfvgltggqifnemmsrqnvdtvfgypggailpvydaihnsdkfnfvlpkheqga
ghmaegyarasgkpgvvlvtsgpgatnvvtpmadafadgipmvvftgqvptsaigtdafq
eadvvgisrsctkwnvmvksveelplrineafeiatsgrpgpvlvdlpkdvtaailrnpi
ptkttlptsraqdefvmqsinkaadlinlakkpvlyvgagilnhadgprllkelsdraqi
pvtttlqglgsfdqedpksldmlgmhgcatanlavqnadliiavgarfddrvtgniskfa
pearraaaegrggiihfevspkninkvvqtqiavegdattnlgkmmskifpvkersewfa
qinkwkkeypyaymeetpgskikpqtvikklskvandtgrhvivttgvgqhqmwaaqhwt
wrnphtfitsgglgtmgyglpaaigaqvakpeslvididgdasfnmtltelssavqagtp
vkililnneeqgmvtqwqslfyehryshthqlnpdfiklaeamglkglrvkkqeeldakl
kefvstkgpvllevevdkkvpvlpmvaggsgldefinfdpeverqqtelrhkrtggkh

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5wkcD (D:)
mhhhhhhssglvprgsgmketaaakferqhmdspdlgtddddkamgsapsfnvdpleqpa
epsklakklraepdmdtsfvgltggqifnemmsrqnvdtvfgypggailpvydaihnsdk
fnfvlpkheqgaghmaegyarasgkpgvvlvtsgpgatnvvtpmadafadgipmvvftgq
vptsaigtdafqeadvvgisrsctkwnvmvksveelplrineafeiatsgrpgpvlvdlp
kdvtaailrnpiptkttlpsnalnqltsraqdefvmqsinkaadlinlakkpvlyvgagi
lnhadgprllkelsdraqipvtttlqglgsfdqedpksldmlgmhgcatanlavqnadli
iavgarfddrvtgniskfapearraaaegrggiihfevspkninkvvqtqiavegdattn
lgkmmskifpvkersewfaqinkwkkeypyaymeetpgskikpqtvikklskvandtgrh
vivttgvgqhqmwaaqhwtwrnphtfitsgglgtmgyglpaaigaqvakpeslvididgd
asfnmtltelssavqagtpvkililnneeqgmvtqwqslfyehryshthqlnpdfiklae
amglkglrvkkqeeldaklkefvstkgpvllevevdkkvpvlpmvaggsgldefinfdpe
verqqtelrhkrtggkh

    Sequence, based on observed residues (ATOM records): (download) 
    >5wkcD (D:)
dmdtsfvgltggqifnemmsrqnvdtvfgypggailpvydaihnsdkfnfvlpkheqgag
hmaegyarasgkpgvvlvtsgpgatnvvtpmadafadgipmvvftgqvptsaigtdafqe
advvgisrsctkwnvmvksveelplrineafeiatsgrpgpvlvdlpkdvtaailrnpip
tkttlpsraqdefvmqsinkaadlinlakkpvlyvgagilnhadgprllkelsdraqipv
tttlqglgsfdqedpksldmlgmhgcatanlavqnadliiavgarfddrvtgniskfape
arraaaegrggiihfevspkninkvvqtqiavegdattnlgkmmskifpvkersewfaqi
nkwkkeypyaymeetpgskikpqtvikklskvandtgrhvivttgvgqhqmwaaqhwtwr
nphtfitsgglgtmgyglpaaigaqvakpeslvididgdasfnmtltelssavqagtpvk
ililnneeqgmvtqwqslfyehryshthqlnpdfiklaeamglkglrvkkqeeldaklke
fvstkgpvllevevdkkvpvlpmvaggsgldefinfdpeverqqtelrhkrtggkh

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >5wkcE (E:)
mhhhhhhssglvprgsgmketaaakferqhmdspdlgtddddkamgsapsfnvdpleqpa
epsklakklraepdmdtsfvgltggqifnemmsrqnvdtvfgypggailpvydaihnsdk
fnfvlpkheqgaghmaegyarasgkpgvvlvtsgpgatnvvtpmadafadgipmvvftgq
vptsaigtdafqeadvvgisrsctkwnvmvksveelplrineafeiatsgrpgpvlvdlp
kdvtaailrnpiptkttlpsnalnqltsraqdefvmqsinkaadlinlakkpvlyvgagi
lnhadgprllkelsdraqipvtttlqglgsfdqedpksldmlgmhgcatanlavqnadli
iavgarfddrvtgniskfapearraaaegrggiihfevspkninkvvqtqiavegdattn
lgkmmskifpvkersewfaqinkwkkeypyaymeetpgskikpqtvikklskvandtgrh
vivttgvgqhqmwaaqhwtwrnphtfitsgglgtmgyglpaaigaqvakpeslvididgd
asfnmtltelssavqagtpvkililnneeqgmvtqwqslfyehryshthqlnpdfiklae
amglkglrvkkqeeldaklkefvstkgpvllevevdkkvpvlpmvaggsgldefinfdpe
verqqtelrhkrtggkh

    Sequence, based on observed residues (ATOM records): (download) 
    >5wkcE (E:)
dmdtsfvgltggqifnemmsrqnvdtvfgypggailpvydaihnsdkfnfvlpkheqgag
hmaegyarasgkpgvvlvtsgpgatnvvtpmadafadgipmvvftgqvptsaigtdafqe
advvgisrsctkwnvmvksveelplrineafeiatsgrpgpvlvdlpkdvtaailrnpip
tkttlpdefvmqsinkaadlinlakkpvlyvgagilnhadgprllkelsdraqipvtttl
qglgsfdqedpksldmlgmhgcatanlavqnadliiavgarfddrvtgniskfapearra
aaegrggiihfevspkninkvvqtqiavegdattnlgkmmskifpvkersewfaqinkwk
keypyaymeetpgskikpqtvikklskvandtgrhvivttgvgqhqmwaaqhwtwrnpht
fitsgglgtmgyglpaaigaqvakpeslvididgdasfnmtltelssavqagtpvkilil
nneeqgmvtqwqslfyehryshthqlnpdfiklaeamglkglrvkkqeeldaklkefvst
kgpvllevevdkkvpvlpmvaggsgldefinfdpeverqqtelrhkrtggkh