PDB entry 5vzr

View 5vzr on RCSB PDB site
Description: Crystal Structure of MERS-CoV neutralizing antibody G4 Fab
Class: immune system
Keywords: immune system, antibody, neutralizing
Deposited on 2017-05-29, released 2017-08-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-11, with a file datestamp of 2019-12-06.
Experiment type: XRAY
Resolution: 1.57 Å
R-factor: N/A
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: G4 antibody heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 5VZR (0-End)
    Domains in SCOPe 2.08: d5vzra_
  • Chain 'B':
    Compound: G4 antibody light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 5VZR (0-End)
    Domains in SCOPe 2.08: d5vzrb1, d5vzrb2
  • Chain 'H':
    Compound: G4 antibody heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 5VZR (0-End)
    Domains in SCOPe 2.08: d5vzrh_
  • Chain 'L':
    Compound: G4 antibody light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 5VZR (0-End)
    Domains in SCOPe 2.08: d5vzrl1, d5vzrl2
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5vzrA (A:)
evqlqqsgpelvrpgvsvkisckgsgytftdyaihwvkqshakslewigvfstyygntny
nqkfkgratmtvdkssstaymelarltsedsaiyycarksyyvdyvdamdywgqgtsvtv
ssasttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlq
sdlytlsssvtvpsstwpsetvtcnvahpasstkvdkkivprdcgkglevlfq

    Sequence, based on observed residues (ATOM records): (download) 
    >5vzrA (A:)
evqlqqsgpelvrpgvsvkisckgsgytftdyaihwvkqshakslewigvfstyygntny
nqkfkgratmtvdkssstaymelarltsedsaiyycarksyyvdyvdamdywgqgtsvtv
ssasttppsvyplapqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdly
tlsssvtvpsstwpsetvtcnvahpasstkvdkkivp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5vzrB (B:)
divltqspaslavslgqratiscrasesvdnygisfmnwfqqkpgqppkllisatsnqgs
gvparfigsgsgtdfslnihpveeddtamyfcqqskevprtfgggtkleikrtdaaptvs
ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
stltltkdeyerhnsytceathktstspivksfnrnec

    Sequence, based on observed residues (ATOM records): (download) 
    >5vzrB (B:)
divltqspaslavslgqratiscrasesvdnygisfmnwfqqkpgqppkllisaarfigs
gsgtdfslnihpveeddtamyfcqqskevprtfgggtkleikrtdaaptvsifppsseql
tsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltltkde
yerhnsytceathktstspivksfnrne

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >5vzrH (H:)
evqlqqsgpelvrpgvsvkisckgsgytftdyaihwvkqshakslewigvfstyygntny
nqkfkgratmtvdkssstaymelarltsedsaiyycarksyyvdyvdamdywgqgtsvtv
ssasttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlq
sdlytlsssvtvpsstwpsetvtcnvahpasstkvdkkivprdcgkglevlfq

    Sequence, based on observed residues (ATOM records): (download) 
    >5vzrH (H:)
evqlqqsgpelvrpgvsvkisckgsgytftdyaihwvkqshakslewigvfstyygntny
nqkfkgratmtvdkssstaymelarltsedsaiyycarksyyvdyvdamdywgqgtsvtv
ssasttppsvyplapgssmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlyt
lsssvtvpsstwpsetvtcnvahpasstkvdkkivprd

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >5vzrL (L:)
divltqspaslavslgqratiscrasesvdnygisfmnwfqqkpgqppkllisatsnqgs
gvparfigsgsgtdfslnihpveeddtamyfcqqskevprtfgggtkleikrtdaaptvs
ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
stltltkdeyerhnsytceathktstspivksfnrnec

    Sequence, based on observed residues (ATOM records): (download) 
    >5vzrL (L:)
divltqspaslavslgqratiscrasesvdnygisfmnwfqqkpgqppkllisatarfig
sgsgtdfslnihpveeddtamyfcqqskevprtfgggtkleikrtdaaptvsifppsseq
ltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltltkd
eyerhnsytceathktstspivksfnrne