PDB entry 5vye

View 5vye on RCSB PDB site
Description: Crystal Structure of L-Threonine Aldolase from Pseudomonas putida
Class: lyase
Keywords: PLP, threonine aldolase, L-threonine aldolase, aldolase, LYASE
Deposited on 2017-05-25, released 2018-06-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-06-27, with a file datestamp of 2018-06-22.
Experiment type: XRAY
Resolution: 2.28 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: L-threonine aldolase
    Species: Pseudomonas putida [TaxId:303]
    Gene: A3L25_23170, B7H18_06210
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5vyea_
  • Chain 'B':
    Compound: L-threonine aldolase
    Species: Pseudomonas putida [TaxId:303]
    Gene: A3L25_23170, B7H18_06210
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5vyeb_
  • Chain 'C':
    Compound: L-threonine aldolase
    Species: Pseudomonas putida [TaxId:303]
    Gene: A3L25_23170, B7H18_06210
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5vyec_
  • Chain 'D':
    Compound: L-threonine aldolase
    Species: Pseudomonas putida [TaxId:303]
    Gene: A3L25_23170, B7H18_06210
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5vyed_
  • Heterogens: PLR, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5vyeA (A:)
mtdksqqfasdnysgicpeawaamekanhghdraygddqwteraseyfrnlfetdcevff
afngtaanslalaslcqsyhsvicsetahvetdecgapeffsngsklltaasvngkltpq
sirevalkrqdihypkprvvtitqatevgtvyrpdelkaisatckelglnlhmdgarftn
acaflgcspaeltwkagvdvlcfggtkngmavgeailffnrqlaedfdyrckqagqlask
mrflsapwvglledgawlrhgnhanhcaqllallvsdlpgvelmfpveangvflqmpeha
iealrakgwrfytfigsggarfmcswdteeervrelaadirsiita

    Sequence, based on observed residues (ATOM records): (download) 
    >5vyeA (A:)
ksqqfasdnysgicpeawaamekanhghdraygddqwteraseyfrnlfetdcevffafn
gtaanslalaslcqsyhsvicsetahvetdecgapeffsngsklltaasvngkltpqsir
evalkrqdihypkprvvtitqatevgtvyrpdelkaisatckelglnlhmdgarftnaca
flgcspaeltwkagvdvlcfggtkngmavgeailffnrqlaedfdyrckqagqlaskmrf
lsapwvglledgawlrhgnhanhcaqllallvsdlpgvelmfpveangvflqmpehaiea
lrakgwrfytfigsggarfmcswdteeervrelaadirsiita

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5vyeB (B:)
mtdksqqfasdnysgicpeawaamekanhghdraygddqwteraseyfrnlfetdcevff
afngtaanslalaslcqsyhsvicsetahvetdecgapeffsngsklltaasvngkltpq
sirevalkrqdihypkprvvtitqatevgtvyrpdelkaisatckelglnlhmdgarftn
acaflgcspaeltwkagvdvlcfggtkngmavgeailffnrqlaedfdyrckqagqlask
mrflsapwvglledgawlrhgnhanhcaqllallvsdlpgvelmfpveangvflqmpeha
iealrakgwrfytfigsggarfmcswdteeervrelaadirsiita

    Sequence, based on observed residues (ATOM records): (download) 
    >5vyeB (B:)
dksqqfasdnysgicpeawaamekanhghdraygddqwteraseyfrnlfetdcevffaf
ngtaanslalaslcqsyhsvicsetahvetdecgapeffsngsklltaasvngkltpqsi
revalkrqdihypkprvvtitqatevgtvyrpdelkaisatckelglnlhmdgarftnac
aflgcspaeltwkagvdvlcfggtkngmavgeailffnrqlaedfdyrckqagqlaskmr
flsapwvglledgawlrhgnhanhcaqllallvsdlpgvelmfpveangvflqmpehaie
alrakgwrfytfigsggarfmcswdteeervrelaadirsiita

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5vyeC (C:)
mtdksqqfasdnysgicpeawaamekanhghdraygddqwteraseyfrnlfetdcevff
afngtaanslalaslcqsyhsvicsetahvetdecgapeffsngsklltaasvngkltpq
sirevalkrqdihypkprvvtitqatevgtvyrpdelkaisatckelglnlhmdgarftn
acaflgcspaeltwkagvdvlcfggtkngmavgeailffnrqlaedfdyrckqagqlask
mrflsapwvglledgawlrhgnhanhcaqllallvsdlpgvelmfpveangvflqmpeha
iealrakgwrfytfigsggarfmcswdteeervrelaadirsiita

    Sequence, based on observed residues (ATOM records): (download) 
    >5vyeC (C:)
sqqfasdnysgicpeawaamekanhghdraygddqwteraseyfrnlfetdcevffafng
taanslalaslcqsyhsvicsetahvetdecgapeffsngsklltaasvngkltpqsire
valkrqdihypkprvvtitqatevgtvyrpdelkaisatckelglnlhmdgarftnacaf
lgcspaeltwkagvdvlcfggtkngmavgeailffnrqlaedfdyrckqagqlaskmrfl
sapwvglledgawlrhgnhanhcaqllallvsdlpgvelmfpveangvflqmpehaieal
rakgwrfytfigsggarfmcswdteeervrelaadirsiita

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5vyeD (D:)
mtdksqqfasdnysgicpeawaamekanhghdraygddqwteraseyfrnlfetdcevff
afngtaanslalaslcqsyhsvicsetahvetdecgapeffsngsklltaasvngkltpq
sirevalkrqdihypkprvvtitqatevgtvyrpdelkaisatckelglnlhmdgarftn
acaflgcspaeltwkagvdvlcfggtkngmavgeailffnrqlaedfdyrckqagqlask
mrflsapwvglledgawlrhgnhanhcaqllallvsdlpgvelmfpveangvflqmpeha
iealrakgwrfytfigsggarfmcswdteeervrelaadirsiita

    Sequence, based on observed residues (ATOM records): (download) 
    >5vyeD (D:)
sqqfasdnysgicpeawaamekanhghdraygddqwteraseyfrnlfetdcevffafng
taanslalaslcqsyhsvicsetahvetdecgapeffsngsklltaasvngkltpqsire
valkrqdihypkprvvtitqatevgtvyrpdelkaisatckelglnlhmdgarftnacaf
lgcspaeltwkagvdvlcfggtkngmavgeailffnrqlaedfdyrckqagqlaskmrfl
sapwvglledgawlrhgnhanhcaqllallvsdlpgvelmfpveangvflqmpehaieal
rakgwrfytfigsggarfmcswdteeervrelaadirsiita