PDB entry 5vmq

View 5vmq on RCSB PDB site
Description: structure of the r105a mutant catalytic trimer of escherichia coli aspartate transcarbamoylase at 2.0-a resolution
Class: transferase
Keywords: Rossman fold, Mutant, Pyrimidine biosynthesis, Aspartate carbamoyltransferase, TRANSFERASE
Deposited on 2017-04-28, released 2017-05-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 2.01 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: aspartate carbamoyltransferase
    Species: Escherichia coli O45:K1 (strain S88 / ExPEC) [TaxId:585035]
    Gene: pyrB, ECS88_4835
    Database cross-references and differences (RAF-indexed):
    • Uniprot B7MLQ3 (0-309)
      • engineered mutation (104)
    Domains in SCOPe 2.08: d5vmqa1, d5vmqa2
  • Chain 'B':
    Compound: aspartate carbamoyltransferase
    Species: Escherichia coli O45:K1 (strain S88 / ExPEC) [TaxId:585035]
    Gene: pyrB, ECS88_4835
    Database cross-references and differences (RAF-indexed):
    • Uniprot B7MLQ3
      • engineered mutation (104)
    Domains in SCOPe 2.08: d5vmqb1, d5vmqb2
  • Chain 'C':
    Compound: aspartate carbamoyltransferase
    Species: Escherichia coli O45:K1 (strain S88 / ExPEC) [TaxId:585035]
    Gene: pyrB, ECS88_4835
    Database cross-references and differences (RAF-indexed):
    • Uniprot B7MLQ3 (0-End)
      • engineered mutation (104)
    Domains in SCOPe 2.08: d5vmqc1, d5vmqc2
  • Heterogens: CA, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5vmqA (A:)
anplyqkhiisindlsrddlnlvlataaklkanpqpellkhkviascffeastrtrlsfe
tsmhrlgasvvgfsdsantslgkkgetladtisvistyvdaivmahpqegaarlatefsg
nvpvlnagdgsnqhptqtlldlftiqetqgrldnlhvamvgdlkygrtvhsltqalakfd
gnrfyfiapdalampqyildmldekgiawslhssieevmaevdilymtrvqkerldpsey
anvkaqfvlrasdlhnakanmkvlhplprvdeiatdvdktphawyfqqagngifarqall
alvlnrdlvl

    Sequence, based on observed residues (ATOM records): (download) 
    >5vmqA (A:)
anplyqkhiisindlsrddlnlvlataaklkanpqpellkhkviascffeastrtrlsfe
tsmhrlgasvvgfsdsagetladtisvistyvdaivmahpqegaarlatefsgnvpvlna
ghptqtlldlftiqetqgrldnlhvamvgdlkygrtvhsltqalakfdgnrfyfiapdal
ampqyildmldekgiawslhssieevmaevdilymtrvqkerldpseyanvkaqfvlras
dlhnakanmkvlhplprvdeiatdvdktphawyfqqagngifarqallalvlnrdlvl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5vmqB (B:)
anplyqkhiisindlsrddlnlvlataaklkanpqpellkhkviascffeastrtrlsfe
tsmhrlgasvvgfsdsantslgkkgetladtisvistyvdaivmahpqegaarlatefsg
nvpvlnagdgsnqhptqtlldlftiqetqgrldnlhvamvgdlkygrtvhsltqalakfd
gnrfyfiapdalampqyildmldekgiawslhssieevmaevdilymtrvqkerldpsey
anvkaqfvlrasdlhnakanmkvlhplprvdeiatdvdktphawyfqqagngifarqall
alvlnrdlvl

    Sequence, based on observed residues (ATOM records): (download) 
    >5vmqB (B:)
nplyqkhiisindlsrddlnlvlataaklkanpqpellkhkviascffeastrtrlsfet
smhrlgasvvgfsdsantslgkkgetladtisvistyvdaivmahpqegaarlatefsgn
vpvlnagdgsnqhptqtlldlftiqetqgrldnlhvamvgdlkygrtvhsltqalakfdg
nrfyfiapdalampqyildmldekgiawslhssieevmaevdilymtrvqfvlrasdlhn
akanmkvlhplprvdeiatdvdktphawyfqqagngifarqallalvln

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5vmqC (C:)
anplyqkhiisindlsrddlnlvlataaklkanpqpellkhkviascffeastrtrlsfe
tsmhrlgasvvgfsdsantslgkkgetladtisvistyvdaivmahpqegaarlatefsg
nvpvlnagdgsnqhptqtlldlftiqetqgrldnlhvamvgdlkygrtvhsltqalakfd
gnrfyfiapdalampqyildmldekgiawslhssieevmaevdilymtrvqkerldpsey
anvkaqfvlrasdlhnakanmkvlhplprvdeiatdvdktphawyfqqagngifarqall
alvlnrdlvl

    Sequence, based on observed residues (ATOM records): (download) 
    >5vmqC (C:)
anplyqkhiisindlsrddlnlvlataaklkanpqpellkhkviascffeastrtrlsfe
tsmhrlgasvvgfsdsantslgkkgetladtisvistyvdaivmahpqegaarlatefsg
nvpvlnagdgsnqhptqtlldlftiqetqgrldnlhvamvgdlkygrtvhsltqalakfd
gnrfyfiapdalampqyildmldekgiawslhssieevmaevdilymtrvqkerldpsey
anvkaqfvlrasdlhnakanmkvlhplprvdeiatdvdktphawyfqqagngifarqall
alvlnrdlv