PDB entry 5vkf

View 5vkf on RCSB PDB site
Description: RHCC in complex with Naphthalene
Class: transport protein
Keywords: nanotube, Polycyclic aromatic hydrocarbons, passive sample device, surface layer, TRANSPORT PROTEIN
Deposited on 2017-04-21, released 2018-04-25
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-04-25, with a file datestamp of 2018-04-20.
Experiment type: XRAY
Resolution: 2.75 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: tetrabrachion
    Species: Staphylothermus marinus [TaxId:2280]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q54436 (2-51)
      • expression tag (0-1)
    Domains in SCOPe 2.07: d5vkfa1, d5vkfa2
  • Chain 'B':
    Compound: tetrabrachion
    Species: Staphylothermus marinus [TaxId:2280]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q54436 (2-51)
      • expression tag (0-1)
    Domains in SCOPe 2.07: d5vkfb1, d5vkfb2
  • Chain 'C':
    Compound: tetrabrachion
    Species: Staphylothermus marinus [TaxId:2280]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q54436 (2-51)
      • expression tag (0-1)
    Domains in SCOPe 2.07: d5vkfc1, d5vkfc2
  • Chain 'D':
    Compound: tetrabrachion
    Species: Staphylothermus marinus [TaxId:2280]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q54436 (2-51)
      • expression tag (0-1)
    Domains in SCOPe 2.07: d5vkfd1, d5vkfd2
  • Heterogens: SO4, NPY, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5vkfA (A:)
    gsiinetaddivyrltviiddryeslknlitlradrlemiindnvstilasi
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5vkfB (B:)
    gsiinetaddivyrltviiddryeslknlitlradrlemiindnvstilasi
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5vkfC (C:)
    gsiinetaddivyrltviiddryeslknlitlradrlemiindnvstilasi
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5vkfD (D:)
    gsiinetaddivyrltviiddryeslknlitlradrlemiindnvstilasi