PDB entry 5vg7

View 5vg7 on RCSB PDB site
Description: Crystal Structure of the R503Q missense variant of human PGM1
Class: isomerase
Keywords: phosphoglucomutase-1, PGM1, isomerase, phosphoryl transfer
Deposited on 2017-04-10, released 2018-06-20
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-06-20, with a file datestamp of 2018-06-15.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphoglucomutase-1
    Species: Homo sapiens [TaxId:9606]
    Gene: PGM1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P36871 (2-563)
      • expression tag (0-1)
      • engineered mutation (504)
    Domains in SCOPe 2.07: d5vg7a1, d5vg7a2, d5vg7a3, d5vg7a4, d5vg7a5
  • Chain 'B':
    Compound: Phosphoglucomutase-1
    Species: Homo sapiens [TaxId:9606]
    Gene: PGM1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P36871 (2-563)
      • expression tag (1)
      • engineered mutation (504)
    Domains in SCOPe 2.07: d5vg7b1, d5vg7b2, d5vg7b3, d5vg7b4, d5vg7b5
  • Heterogens: MG, SO4, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5vg7A (A:)
snmvkivtvktqayqdqkpgtsglrkrvkvfqssanyaenfiqsiistvepaqrqeatlv
vggdgrfymkeaiqliariaaangigrlvigqngilstpavsciirkikaiggiiltash
npggpngdfgikfnisnggpapeaitdkifqisktieeyavcpdlkvdlgvlgkqqfdle
nkfkpftveivdsveayatmlrsifdfsalkellsgpnrlkiridamhgvvgpyvkkilc
eelgapansavncvpledfgghhpdpnltyaadlvetmksgehdfgaafdgdgdrnmilg
khgffvnpsdsvaviaanifsipyfqqtgvrgfarsmptsgaldrvasatkialyetptg
wkffgnlmdasklslcgeesfgtgsdhirekdglwavlawlsilatrkqsvedilkdhwq
kygrnfftrydyeeveaegankmmkdlealmfdrsfvgkqfsandkvytvekadnfeysd
pvdgsisrnqglrliftdgsrivfqlsgtgsagatirlyidsyekdvakinqdpqvmlap
lisialkvsqlqertgrtaptvit

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5vg7B (B:)
snmvkivtvktqayqdqkpgtsglrkrvkvfqssanyaenfiqsiistvepaqrqeatlv
vggdgrfymkeaiqliariaaangigrlvigqngilstpavsciirkikaiggiiltash
npggpngdfgikfnisnggpapeaitdkifqisktieeyavcpdlkvdlgvlgkqqfdle
nkfkpftveivdsveayatmlrsifdfsalkellsgpnrlkiridamhgvvgpyvkkilc
eelgapansavncvpledfgghhpdpnltyaadlvetmksgehdfgaafdgdgdrnmilg
khgffvnpsdsvaviaanifsipyfqqtgvrgfarsmptsgaldrvasatkialyetptg
wkffgnlmdasklslcgeesfgtgsdhirekdglwavlawlsilatrkqsvedilkdhwq
kygrnfftrydyeeveaegankmmkdlealmfdrsfvgkqfsandkvytvekadnfeysd
pvdgsisrnqglrliftdgsrivfqlsgtgsagatirlyidsyekdvakinqdpqvmlap
lisialkvsqlqertgrtaptvit

    Sequence, based on observed residues (ATOM records): (download) 
    >5vg7B (B:)
nmvkivtvktqayqdqkpgtsglrkrvkvfqssanyaenfiqsiistvepaqrqeatlvv
ggdgrfymkeaiqliariaaangigrlvigqngilstpavsciirkikaiggiiltashn
pggpngdfgikfnisnggpapeaitdkifqisktieeyavcpdlkvdlgvlgkqqfdlen
kfkpftveivdsveayatmlrsifdfsalkellspnrlkiridamhgvvgpyvkkilcee
lgapansavncvpledfgghhpdpnltyaadlvetmksgehdfgaafdgdgdrnmilgkh
gffvnpsdsvaviaanifsipyfqqtgvrgfarsmptsgaldrvasatkialyetptgwk
ffgnlmdasklslcgeesfgtgsdhirekdglwavlawlsilatrkqsvedilkdhwqky
grnfftrydyeeveaegankmmkdlealmfdrsfvgkqfsandkvytvekadnfeysdpv
dgsisrnqglrliftdgsrivfqlsgtgsagatirlyidsyekdvakinqdpqvmlapli
sialkvsqlqertgrtaptvit