PDB entry 5vf2

View 5vf2 on RCSB PDB site
Description: scFv 2D10 re-refined as a complex with trehalose replacing the original alpha-1,6-mannobiose
Class: immune system
Keywords: immune system re-refinement, immune system
Deposited on 2017-04-06, released 2017-12-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: N/A
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: scFv 2D10
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 5VF2 (0-250)
    Domains in SCOPe 2.08: d5vf2a1, d5vf2a2
  • Heterogens: MES, UNX, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5vf2A (A:)
meiqlqqsgpelvkpgasvkisckasgysftdyimlwvkqshgkslewigninpyygsts
ynlkfkgkatltvdkssstaymqlnsltsedsavyycarknyygssldywgqgttltvss
akttggggsggggsggggsdvvmtqtpfslpvslgdqasiscrssqslvhsngntylhwy
lqkpgqspklliykvsnrfsgvpdrfsgsgsgtdftlkisrveaedlgvyfcsqsthvpy
tfgggtkleik

    Sequence, based on observed residues (ATOM records): (download) 
    >5vf2A (A:)
meiqlqqsgpelvkpgasvkisckasgysftdyimlwvkqshgkslewigninpyygsts
ynlkfkgkatltvdkssstaymqlnsltsedsavyycarknyygssldywgqgttltvss
aktgsdvvmtqtpfslpvslgdqasiscrssqslvhsngntylhwylqkpgqspklliyk
vsnrfsgvpdrfsgsgsgtdftlkisrveaedlgvyfcsqsthvpytfgggtkleik