PDB entry 5vcq
View 5vcq on RCSB PDB site
Description: A Hyrdrogen Producing Hybrid Streptavidin-Diiron Catalyst
Class: Biotin Binding Protein
Keywords: Protein-organometallic catalyst, hydrogenase, hybrid protein, 4Fe-4S clusters, Biotin Binding Protein
Deposited on
2017-03-31, released
2018-04-04
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-12-04, with a file datestamp of
2019-11-29.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: N/A
AEROSPACI score: 0.3
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: streptavidin
Species: Streptomyces avidinii [TaxId:1895]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5vcqa_ - Chain 'B':
Compound: streptavidin
Species: Streptomyces avidinii [TaxId:1895]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5vcqb_ - Chain 'C':
Compound: streptavidin
Species: Streptomyces avidinii [TaxId:1895]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5vcqc_ - Chain 'D':
Compound: streptavidin
Species: Streptomyces avidinii [TaxId:1895]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5vcqd_ - Heterogens: BN7, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5vcqA (A:)
mrkivvaaiavslttvsitasasadpskdskaqvsaaeagitgtwynqlgstfivtagad
galtgtyesavgnaesryvltgrydsapatdgsgtalgwtvawknnyrnahsattwsgqy
vggaearintqwlltsgtteanawkstlvghdtftkvkpsaasidaakkagvnngnplda
vqq
Sequence, based on observed residues (ATOM records): (download)
>5vcqA (A:)
eagitgtwynqlgstfivtagadgaltgtyesavgnaesryvltgrydsapatdgsgtal
gwtvawknnyrnahsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftkv
k
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5vcqB (B:)
mrkivvaaiavslttvsitasasadpskdskaqvsaaeagitgtwynqlgstfivtagad
galtgtyesavgnaesryvltgrydsapatdgsgtalgwtvawknnyrnahsattwsgqy
vggaearintqwlltsgtteanawkstlvghdtftkvkpsaasidaakkagvnngnplda
vqq
Sequence, based on observed residues (ATOM records): (download)
>5vcqB (B:)
gitgtwynqlgstfivtagadgaltgtyesavgnaesryvltgrydsapatdgsgtalgw
tvawknnyrnahsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftkvkp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>5vcqC (C:)
mrkivvaaiavslttvsitasasadpskdskaqvsaaeagitgtwynqlgstfivtagad
galtgtyesavgnaesryvltgrydsapatdgsgtalgwtvawknnyrnahsattwsgqy
vggaearintqwlltsgtteanawkstlvghdtftkvkpsaasidaakkagvnngnplda
vqq
Sequence, based on observed residues (ATOM records): (download)
>5vcqC (C:)
eagitgtwynqlgstfivtagadgaltgtyesavgnaesryvltgrydsapatdgsgtal
gwtvawknnyrnahsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftkv
k
- Chain 'D':
Sequence, based on SEQRES records: (download)
>5vcqD (D:)
mrkivvaaiavslttvsitasasadpskdskaqvsaaeagitgtwynqlgstfivtagad
galtgtyesavgnaesryvltgrydsapatdgsgtalgwtvawknnyrnahsattwsgqy
vggaearintqwlltsgtteanawkstlvghdtftkvkpsaasidaakkagvnngnplda
vqq
Sequence, based on observed residues (ATOM records): (download)
>5vcqD (D:)
gitgtwynqlgstfivtagadgaltgtyesavgnaesryvltgrydsapatdgsgtalgw
tvawknnyrnahsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftkvkp