PDB entry 5v2w

View 5v2w on RCSB PDB site
Description: Crystal structure of a LuxS from salmonella typhi
Class: lyase
Keywords: Quroum sensing protein, LuxS, Salmonella typhi, S-ribosylhomocysteine lyase, LYASE
Deposited on 2017-03-06, released 2017-08-23
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-08-23, with a file datestamp of 2017-08-18.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: S-ribosylhomocysteine lyase
    Species: Salmonella typhi [TaxId:90370]
    Gene: luxS, STY2943, t2714
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8Z4D7
      • engineered mutation (20)
    Domains in SCOPe 2.06: d5v2wa_
  • Chain 'B':
    Compound: S-ribosylhomocysteine lyase
    Species: Salmonella typhi [TaxId:90370]
    Gene: luxS, STY2943, t2714
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8Z4D7 (Start-170)
      • engineered mutation (20)
      • expression tag (171-173)
    Domains in SCOPe 2.06: d5v2wb1, d5v2wb2
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5v2wA (A:)
mplldsfavdhtrmqapavrtaktmntphgdaitvfdlrfcipnkevmpekgihtlehlf
agfmrdhlngngveiidispmgcrtgfymsligtpdeqrvadawkaamadvlkvqdqnqi
pelnvyqcgtyqmhslseaqdiarhilerdvrvnsnkelalpkeklqelhilehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5v2wA (A:)
lldsfavdhtrmqapavrtaktmntphgdaitvfdlrfcipnkevmpekgihtlehlfag
fmrdhlngngveiidispmgcrtgfymsligtpdeqrvadawkaamadvlkvqdqnqipe
lnvyqcgtyqmhslseaqdiarhilerdvrvnsnkelalpkeklqel

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5v2wB (B:)
mplldsfavdhtrmqapavrtaktmntphgdaitvfdlrfcipnkevmpekgihtlehlf
agfmrdhlngngveiidispmgcrtgfymsligtpdeqrvadawkaamadvlkvqdqnqi
pelnvyqcgtyqmhslseaqdiarhilerdvrvnsnkelalpkeklqelhilehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5v2wB (B:)
lldsfavdhtrmqapavrtaktmntphgdaitvfdlrfcipnkevmpekgihtlehlfag
fmrdhlngngveiidispmgcrtgfymsligtpdeqrvadawkaamadvlkvqdqnqipe
lnvyqcgtyqmhslseaqdiarhilerdvrvnsnkelalpkeklqelhileh