PDB entry 5umz

View 5umz on RCSB PDB site
Description: Structure of TNRC6A NLS in complex with importin-alpha
Class: protein transport
Keywords: mRNA decay, miRNA ARM repeat, nuclear transport, PROTEIN TRANSPORT
Deposited on 2017-01-30, released 2017-12-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'B':
    Compound: Importin subunit alpha-1
    Species: Mus musculus [TaxId:10090]
    Gene: Kpna2, Rch1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5umzb_
  • Chain 'D':
    Compound: tnrc6a
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 5UMZ (Start-12)
  • Chain 'E':
    Compound: tnrc6a
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 5UMZ
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5umzB (B:)
mhhhhhhssglvprgsgmletaaalfernhmdspdlgtddddlamadigsnqgtvnwsve
divkginsnnlesqlqatqaarkllsrekqppidniiraglipkfvsflgktdcspiqfe
sawaltniasgtseqtkavvdggaipafisllasphahiseqavwalgniagdgsafrdl
vikhgaidpllallavpdlstlacgylrnltwtlsnlcrnknpappldaveqilptlvrl
lhhndpevladscwaisyltdgpneriemvvkkgvvpqlvkllgatelpivtpalraign
ivtgtdeqtqkvidagalavfpslltnpktniqkeatwtmsnitagrqdqiqqvvnhglv
pflvgvlskadfktqkeaawaitnytsggtveqivylvhcgiieplmnllsakdtkiiqv
ildaisnifqaaeklgeteklsimieecggldkiealqrhenesvykaslnliekyfsve
eeedqnvvpettsegfafqvqdgapgtfn

    Sequence, based on observed residues (ATOM records): (download) 
    >5umzB (B:)
gtvnwsvedivkginsnnlesqlqatqaarkllsrekqppidniiraglipkfvsflgkt
dcspiqfesawaltniasgtseqtkavvdggaipafisllasphahiseqavwalgniag
dgsafrdlvikhgaidpllallavpdlstlacgylrnltwtlsnlcrnknpappldaveq
ilptlvrllhhndpevladscwaisyltdgpneriemvvkkgvvpqlvkllgatelpivt
palraignivtgtdeqtqkvidagalavfpslltnpktniqkeatwtmsnitagrqdqiq
qvvnhglvpflvgvlskadfktqkeaawaitnytsggtveqivylvhcgiieplmnllsa
kdtkiiqvildaisnifqaaeklgeteklsimieecggldkiealqrhenesvykaslnl
iekyfs

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.