PDB entry 5ue9

View 5ue9 on RCSB PDB site
Description: WT DHODB with orotate bound
Class: oxidoreductase
Keywords: orotate, pyrimidine biosynthesis, FeS cluster, electron transfer, dehydrogenase, oxidoreductase, protein engineering
Deposited on 2016-12-29, released 2017-09-06
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-09-06, with a file datestamp of 2017-09-01.
Experiment type: XRAY
Resolution: 2.72 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: dihydroorotate dehydrogenase
    Species: Lactococcus lactis subsp. lactis [TaxId:1360]
    Gene: pyrD, NCDO895_2365
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5ue9a_
  • Chain 'B':
    Compound: Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit
    Species: Lactococcus lactis subsp. lactis [TaxId:1360]
    Gene: pyrK, NCDO895_2366
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5ue9b1, d5ue9b2
  • Chain 'C':
    Compound: dihydroorotate dehydrogenase
    Species: Lactococcus lactis subsp. lactis [TaxId:1360]
    Gene: pyrD, NCDO895_2365
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5ue9c_
  • Chain 'D':
    Compound: Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit
    Species: Lactococcus lactis subsp. lactis [TaxId:1360]
    Gene: pyrK, NCDO895_2366
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5ue9d1, d5ue9d2
  • Heterogens: FMN, ORO, CL, FAD, FES, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5ue9A (A:)
nrlsvklpgldlknpiipasgcfgfgeeyakyydlnklgsimvkattlhprfgnptprva
etasgmlnaiglqnpglevimaeklpwlnenfpdlpiianvagseeddyvavcakigdap
nvkvielniscpnvkhggqafgtdpdvaaalvkackavskvplyvklspnvtdivpiaka
veaagadgltmintlmgvrfdlktrkpvlanitgglsgpaikpvalklihqvaqvvdipi
igmggvesaqdvlemymagasavavgtanfadpfvcpkiieklpevmdqygidslenliq
evknsk

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5ue9B (B:)
mpklqemmtivsqrevasnifemvlkgelveemdlpgqflhlavpnasmllrrpisissw
dkvaktctilyrigdetsgtyeisklqsgakidvmgplgngfpvdevvstdkilivgggi
gvpplyelakqleekncqmtillgfasekvkilekefaelknvslkiatddgsygtkghv
gmlmeeidfevdalytcgapamlkavakkyeqlerlyismesrmacgigacyacvehdke
denhalkvcedgpvflgkqlll

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5ue9C (C:)
nrlsvklpgldlknpiipasgcfgfgeeyakyydlnklgsimvkattlhprfgnptprva
etasgmlnaiglqnpglevimaeklpwlnenfpdlpiianvagseeddyvavcakigdap
nvkvielniscpnvkhggqafgtdpdvaaalvkackavskvplyvklspnvtdivpiaka
veaagadgltmintlmgvrfdlktrkpvlanitgglsgpaikpvalklihqvaqvvdipi
igmggvesaqdvlemymagasavavgtanfadpfvcpkiieklpevmdqygidslenliq
evknsk

    Sequence, based on observed residues (ATOM records): (download) 
    >5ue9C (C:)
nrlsvklpgldlknpiipasgcfgfgeeyakyydlnklgsimvkattlhprfgnptprva
etasgmlnaiglqnpglevimaeklpwlnenfpdlpiianvagseeddyvavcakigdap
nvkvielniscpnvkhggqafgtdpdvaaalvkackavskvplyvklspnvtdivpiaka
veaagadgltmintlmgvrfdlktrkpvlanitgglsgpaikpvalklihqvaqvvdipi
igmggvesaqdvlemymagasavavgtanfadpfvcpkiieklpevmdqygidslenliq
evkns

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5ue9D (D:)
mpklqemmtivsqrevasnifemvlkgelveemdlpgqflhlavpnasmllrrpisissw
dkvaktctilyrigdetsgtyeisklqsgakidvmgplgngfpvdevvstdkilivgggi
gvpplyelakqleekncqmtillgfasekvkilekefaelknvslkiatddgsygtkghv
gmlmeeidfevdalytcgapamlkavakkyeqlerlyismesrmacgigacyacvehdke
denhalkvcedgpvflgkqlll