PDB entry 5ud4

View 5ud4 on RCSB PDB site
Description: Class II fructose-1,6-bisphosphate aldolase H180Q variant of Helicobacter pylori with TBP
Class: lyase
Keywords: Glycolysis, Metalloenzyme, LYASE
Deposited on 2016-12-23, released 2018-04-11
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-04-11, with a file datestamp of 2018-04-06.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fructose-bisphosphate aldolase
    Species: Helicobacter pylori (strain ATCC 700392 / 26695) [TaxId:85962]
    Gene: fba, HP_0176
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56109 (0-306)
      • conflict (47)
      • conflict (66)
      • engineered mutation (179)
    Domains in SCOPe 2.07: d5ud4a_
  • Chain 'B':
    Compound: Fructose-bisphosphate aldolase
    Species: Helicobacter pylori (strain ATCC 700392 / 26695) [TaxId:85962]
    Gene: fba, HP_0176
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56109 (0-306)
      • conflict (47)
      • conflict (66)
      • engineered mutation (179)
    Domains in SCOPe 2.07: d5ud4b_
  • Heterogens: NA, ZN, P6T, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5ud4A (A:)
mlvkgneillkahkegygvgafnfvnfemlnaifeagneensplfiqasegaikymgidm
avgmvkimceryphipvalhldhgttfescekavkagftsvmidashhafeenleltskv
vkmahnagvsveaelgrlmgiednisvdekdavlvnpkeaeqfvkesqvdylapaigtsq
gafkfkgepkldferlqevkrltniplvlhgasaipdnvrksyldaggdlkgskgvpfef
lqesvkgginkvntdtdlriafiaevrkvanedksqfdlrkffspaqlalknvvkermkl
lgsanki

    Sequence, based on observed residues (ATOM records): (download) 
    >5ud4A (A:)
mlvkgneillkahkegygvgafnfvnfemlnaifeagneensplfiqasegaikymgidm
avgmvkimceryphipvalhldhgttfescekavkagftsvmidashhafeenleltskv
vkmahnagvsveaelgrlvlvnpkeaeqfvkesqvdylapaigtsqgafkfkgepkldfe
rlqevkrltniplvlhgasaipdnvrksyldaggdlkgskgvpfeflqesvkgginkvnt
dtdlriafiaevrkvanedksqfdlrkffspaqlalknvvkermkllgsanki

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5ud4B (B:)
mlvkgneillkahkegygvgafnfvnfemlnaifeagneensplfiqasegaikymgidm
avgmvkimceryphipvalhldhgttfescekavkagftsvmidashhafeenleltskv
vkmahnagvsveaelgrlmgiednisvdekdavlvnpkeaeqfvkesqvdylapaigtsq
gafkfkgepkldferlqevkrltniplvlhgasaipdnvrksyldaggdlkgskgvpfef
lqesvkgginkvntdtdlriafiaevrkvanedksqfdlrkffspaqlalknvvkermkl
lgsanki

    Sequence, based on observed residues (ATOM records): (download) 
    >5ud4B (B:)
mlvkgneillkahkegygvgafnfvnfemlnaifeagneensplfiqasegaikymgidm
avgmvkimceryphipvalhldhgttfescekavkagftsvmidashhafeenleltskv
vkmahnagvsveaelgrlvlvnpkeaeqfvkesqvdylapaigtsqgafkfkgepkldfe
rlqevkrltniplvlhgasaipdnvrksyldaggdlkgskgvpfeflqesvkgginkvnt
dtdlriafiaevrkvanedksqfdlrkffspaqlalknvvkermkllgsanki