PDB entry 5ud0
View 5ud0 on RCSB PDB site
Description: Class II fructose-1,6-bisphosphate aldolase E149A variant of Helicobacter pylori with cleavage products
Class: lyase
Keywords: Glycolysis, Metalloenzyme, LYASE
Deposited on
2016-12-23, released
2018-04-11
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-01-08, with a file datestamp of
2020-01-03.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: N/A
AEROSPACI score: 0.42
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Fructose-bisphosphate aldolase
Species: Helicobacter pylori (strain ATCC 700392 / 26695) [TaxId:85962]
Gene: fba, HP_0176
Database cross-references and differences (RAF-indexed):
- Uniprot P56109 (0-306)
- conflict (47)
- conflict (66)
Domains in SCOPe 2.08: d5ud0a_ - Chain 'B':
Compound: Fructose-bisphosphate aldolase
Species: Helicobacter pylori (strain ATCC 700392 / 26695) [TaxId:85962]
Gene: fba, HP_0176
Database cross-references and differences (RAF-indexed):
- Uniprot P56109 (0-306)
- conflict (47)
- conflict (66)
Domains in SCOPe 2.08: d5ud0b_ - Heterogens: NA, ZN, CA, 13P, G3H, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5ud0A (A:)
mlvkgneillkahkegygvgafnfvnfemlnaifeagneensplfiqasegaikymgidm
avgmvkimceryphipvalhldhgttfescekavkagftsvmidashhafeenleltskv
vkmahnagvsveaelgrlmgiednisvdakdavlvnpkeaeqfvkesqvdylapaigtsh
gafkfkgepkldferlqevkrltniplvlhgasaipdnvrksyldaggdlkgskgvpfef
lqesvkgginkvntdtdlriafiaevrkvanedksqfdlrkffspaqlalknvvkermkl
lgsanki
Sequence, based on observed residues (ATOM records): (download)
>5ud0A (A:)
mlvkgneillkahkegygvgafnfvnfemlnaifeagneensplfiqasegaikymgidm
avgmvkimceryphipvalhldhgttfescekavkagftsvmidashhafeenleltskv
vkmahnagvsveaelglvnpkeaeqfvkesqvdylapaigtshgkldferlqevkrltni
plvlhgasaipdnvrksyldaggdlkgskgvpfeflqesvkgginkvntdtdlriafiae
vrkvanedksqfdlrkffspaqlalknvvkermkllgsanki
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5ud0B (B:)
mlvkgneillkahkegygvgafnfvnfemlnaifeagneensplfiqasegaikymgidm
avgmvkimceryphipvalhldhgttfescekavkagftsvmidashhafeenleltskv
vkmahnagvsveaelgrlmgiednisvdakdavlvnpkeaeqfvkesqvdylapaigtsh
gafkfkgepkldferlqevkrltniplvlhgasaipdnvrksyldaggdlkgskgvpfef
lqesvkgginkvntdtdlriafiaevrkvanedksqfdlrkffspaqlalknvvkermkl
lgsanki
Sequence, based on observed residues (ATOM records): (download)
>5ud0B (B:)
mlvkgneillkahkegygvgafnfvnfemlnaifeagneensplfiqasegaikymgidm
avgmvkimceryphipvalhldhgttfescekavkagftsvmidashhafeenleltskv
vkmahnagvsveaelgrlvnpkeaeqfvkesqvdylapaigtshgafkfkgepkldferl
qevkrltniplvlhgasaipdnvrksyldaggdlkgskgvpfeflqesvkgginkvntdt
dlriafiaevrkvanedksqfdlrkffspaqlalknvvkermkllgsanki