PDB entry 5tpp

View 5tpp on RCSB PDB site
Description: Crystal Structure of DH270.5 (unliganded) from the DH270 Broadly Neutralizing N332-glycan Dependent Lineage
Class: immune system
Keywords: fab fragment, hiv-1, antibody, immune system
Deposited on 2016-10-20, released 2017-03-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-11, with a file datestamp of 2019-12-06.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: DH270.5 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 5TPP (0-End)
    Domains in SCOPe 2.08: d5tpph_
  • Chain 'L':
    Compound: DH270.5 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 5TPP
    Domains in SCOPe 2.08: d5tppl1, d5tppl2
  • Heterogens: NA, CIT, HOH

PDB Chain Sequences:

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >5tppH (H:)
qvqlvqsgaevknpgasvkvscapsgytftdfyihwvrlapgqglewlgwmnpktgrtnq
gqnfqgrvtmtrdtsigtaymelrsltsddtavyycvtgawisdyydssyypnfdhwgqg
tlvtvsgastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtf
pavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscdkhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5tppH (H:)
qvqlvqsgaevknpgasvkvscapsgytftdfyihwvrlapgqglewlgwmnpktgrtnq
gqnfqgrvtmtrdtsigtaymelrsltsddtavyycvtgawisdyydssyypnfdhwgqg
tlvtvsgastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtf
pavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepk

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >5tppL (L:)
lpvltqpasvsgspgqsitisctgtiydvgkfdlvswyqhhpgkapkyliyevkkwpsgv
shrfsgsksgntasltisglqvedeadyyccsfggsaavvcgggtkvtvlgqpkgapsvt
lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
ylsltpeqwkshrsyscqvthegstvektvaptecs

    Sequence, based on observed residues (ATOM records): (download) 
    >5tppL (L:)
vltqpasvsgspgqsitisctgtiydvgkfdlvswyqhhpgkapkyliyevkkwpsgvsh
rfsgsksgntasltisglqvedeadyyccsfggsaavvcgggtkvtvlgqpkgapsvtlf
ppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassyl
sltpeqwkshrsyscqvthegstvektvapte