PDB entry 5toq

View 5toq on RCSB PDB site
Description: High resolution crystal structure of AAT
Class: transferase
Keywords: transferase
Deposited on 2016-10-18, released 2017-03-01
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-04-19, with a file datestamp of 2017-04-14.
Experiment type: XRAY
Resolution: 1.2 Å
R-factor: N/A
AEROSPACI score: 0.65 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Aspartate aminotransferase, cytoplasmic
    Species: Sus scrofa [TaxId:9823]
    Gene: GOT1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00503 (1-413)
      • expression tag (0)
      • conflict (64)
      • conflict (289)
      • conflict (377)
    Domains in SCOPe 2.07: d5toqa1, d5toqa2
  • Chain 'B':
    Compound: Aspartate aminotransferase, cytoplasmic
    Species: Sus scrofa [TaxId:9823]
    Gene: GOT1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00503 (1-End)
      • expression tag (0)
      • conflict (64)
      • conflict (289)
      • conflict (377)
    Domains in SCOPe 2.07: d5toqb1, d5toqb2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5toqA (A:)
    gmappsvfaevpqaqpvlvfkliadfredpdprkvnlgvgayrtddcqpwvlpvvrkveq
    riannsslnheylpilglaefrtcasrlalgddspalqekrvggvqslggtgalrigaef
    larwyngtnnkdtpvyvssptwenhngvfttagfkdirsyrywdtekrgldlqgflsdle
    napefsifvlhacahnptgtdptpeqwkqiasvmkrrflfpffdsayqgfasgnlekdaw
    airyfvsegfelfcaqsfsknfglynervgnltvvakepdsilrvlsqmqkivrvtwsnp
    paqgarivartlsdpelfhewtgnvktmadrilsmrselrarlealktpgtwnhitdqig
    mfsftglnpkqveylinqkhiyllpsgrinmcglttknldyvatsiheavtkiq
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >5toqB (B:)
    gmappsvfaevpqaqpvlvfkliadfredpdprkvnlgvgayrtddcqpwvlpvvrkveq
    riannsslnheylpilglaefrtcasrlalgddspalqekrvggvqslggtgalrigaef
    larwyngtnnkdtpvyvssptwenhngvfttagfkdirsyrywdtekrgldlqgflsdle
    napefsifvlhacahnptgtdptpeqwkqiasvmkrrflfpffdsayqgfasgnlekdaw
    airyfvsegfelfcaqsfsknfglynervgnltvvakepdsilrvlsqmqkivrvtwsnp
    paqgarivartlsdpelfhewtgnvktmadrilsmrselrarlealktpgtwnhitdqig
    mfsftglnpkqveylinqkhiyllpsgrinmcglttknldyvatsiheavtkiq
    

    Sequence, based on observed residues (ATOM records): (download)
    >5toqB (B:)
    gmappsvfaevpqaqlgvgayrtddcqpwvlpvvrkveqriannsslnheylpilglaef
    rtcasrlalgddspalqekrvggvqslggtgalrigaeflarwyngtnnkdtpvyvsspt
    wenhngvfttagfkdirsyrywdtekrgldlqgflsdlenapefsifvlhacahnptgtd
    ptpeqwkqiasvmkrrflfpffdsayqgfasgnlekdawairyfvsegfelfcaqsfskn
    fglynervgnltvvakepdsilrvlsqmqkivrvtwsnppaqgarivartlsdpelfhew
    tgnvktmadrilsmrselrarlealktpgtwnhitdqigmfsftglnpkqveylinqkhi
    yllpsgrinmcglttknldyvatsiheavtki