PDB entry 5tl6
View 5tl6 on RCSB PDB site
Description: Crystal structure of SARS-CoV papain-like protease in complex with the C-terminal domain of human ISG15
Class: Signaling protein/hydrolase
Keywords: Signaling protein, hydrolase, Signaling protein-hydrolase complex
Deposited on
2016-10-10, released
2017-05-03
The last revision prior to the SCOPe 2.06 freeze date was dated
2017-05-03, with a file datestamp of
2017-04-28.
Experiment type: XRAY
Resolution: 2.62 Å
R-factor: N/A
AEROSPACI score: 0.19
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ubiquitin-like protein ISG15
Species: Homo sapiens [TaxId:9606]
Gene: ISG15, G1P2, UCRP
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5tl6a_ - Chain 'B':
Compound: Replicase polyprotein 1ab
Species: Human SARS coronavirus [TaxId:227859]
Gene: rep, 1a-1b
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5tl6b1, d5tl6b2 - Chain 'C':
Compound: Ubiquitin-like protein ISG15
Species: Homo sapiens [TaxId:9606]
Gene: ISG15, G1P2, UCRP
Database cross-references and differences (RAF-indexed):
- Uniprot P05161 (1-78)
- initiating methionine (0)
- engineered mutation (78)
Domains in SCOPe 2.06: d5tl6c_ - Chain 'D':
Compound: Replicase polyprotein 1ab
Species: Human SARS coronavirus [TaxId:227859]
Gene: rep, 1a-1b
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5tl6d1, d5tl6d2 - Heterogens: ZN, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5tl6A (A:)
meplsilvrnnkgrsstyevrltqtvahlkqqvsglegvqddlfwltfegkpledqlplg
eyglkplstvfmnlrlrgx
Sequence, based on observed residues (ATOM records): (download)
>5tl6A (A:)
eplsilvrnnkgrsstyevrltqtvahlkqqvsglegvqddlfwltfegkpledqlplge
yglkplstvfmnlrlrgx
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5tl6B (B:)
masmevktikvfttvdntnlhtqlvdmsmtygqqfgptyldgadvtkikphvnhegktff
vlpsddtlrseafeyyhtldesflgrymsalnhtkkwkfpqvggltsikwadnncylssv
llalqqlevkfnapalqeayyraragdaanfcalilaysnktvgelgdvretmthllqha
nlesakrvlnvvckhcgqktttltgveavmymgtlsydnlktgvsipcvcgrdatqylvq
qessfvmmsappaeyklqqgtflcaneytgnyqcghythitaketlyridgahltkmsey
kgpvtdvfyketsytttik
Sequence, based on observed residues (ATOM records): (download)
>5tl6B (B:)
evktikvfttvdntnlhtqlvdmsmtygqqfgptyldgadvtkikphvnhegktffvlps
ddtlrseafeyyhtldesflgrymsalnhtkkwkfpqvggltsikwadnncylssvllal
qqlevkfnapalqeayyraragdaanfcalilaysnktvgelgdvretmthllqhanles
akrvlnvvckhcgqktttltgveavmymgtlsydnlktgvsipcvcgrdatqylvqqess
fvmmsappaeyklqqgtflcaneytgnyqcghythitaketlyridgahltkmseykgpv
tdvfyketsytttik
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>5tl6C (C:)
meplsilvrnnkgrsstyevrltqtvahlkqqvsglegvqddlfwltfegkpledqlplg
eyglkplstvfmnlrlrgx
- Chain 'D':
Sequence, based on SEQRES records: (download)
>5tl6D (D:)
masmevktikvfttvdntnlhtqlvdmsmtygqqfgptyldgadvtkikphvnhegktff
vlpsddtlrseafeyyhtldesflgrymsalnhtkkwkfpqvggltsikwadnncylssv
llalqqlevkfnapalqeayyraragdaanfcalilaysnktvgelgdvretmthllqha
nlesakrvlnvvckhcgqktttltgveavmymgtlsydnlktgvsipcvcgrdatqylvq
qessfvmmsappaeyklqqgtflcaneytgnyqcghythitaketlyridgahltkmsey
kgpvtdvfyketsytttik
Sequence, based on observed residues (ATOM records): (download)
>5tl6D (D:)
tikvfttvdntnlhtqlvdmsmtygqqfgptyldgadvtkikphvnhegktffvlpsddt
lrseafeyyhtldesflgrymsalnhtkkwkfpqvggltsikwadnncylssvllalqql
evkfnapalqeayyraragdaanfcalilaysnktvgelgdvretmthllqhanlesakr
vlnvvckhcgqktttltgveavmymgtlsydnlktgvsipcvcgrdatqylvqqessfvm
msappaeyklqqgtflcaneytgnyqcghythitaketlyridgahltkmseykgpvtdv
fyketsytttik