PDB entry 5tg3

View 5tg3 on RCSB PDB site
Description: Crystal Structure of Dioclea reflexa seed lectin (DrfL) in complex with X-Man
Class: sugar binding protein
Keywords: Lectin, Dioclea Reflexa, DrfL, X-Man, SUGAR BINDING PROTEIN
Deposited on 2016-09-27, released 2017-02-15
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-09-27, with a file datestamp of 2017-09-22.
Experiment type: XRAY
Resolution: 1.77 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Dioclea reflexa lectin
    Species: Dioclea reflexa [TaxId:1048258]
    Database cross-references and differences (RAF-indexed):
    • PDB 5TG3 (0-236)
    Domains in SCOPe 2.07: d5tg3a_
  • Chain 'B':
    Compound: Dioclea reflexa lectin
    Species: Dioclea reflexa [TaxId:1048258]
    Database cross-references and differences (RAF-indexed):
    • PDB 5TG3 (0-236)
    Domains in SCOPe 2.07: d5tg3b_
  • Chain 'C':
    Compound: Dioclea reflexa lectin
    Species: Dioclea reflexa [TaxId:1048258]
    Database cross-references and differences (RAF-indexed):
    • PDB 5TG3 (0-236)
    Domains in SCOPe 2.07: d5tg3c_
  • Chain 'D':
    Compound: Dioclea reflexa lectin
    Species: Dioclea reflexa [TaxId:1048258]
    Database cross-references and differences (RAF-indexed):
    • PDB 5TG3 (0-236)
    Domains in SCOPe 2.07: d5tg3d_
  • Heterogens: CA, MN, XMM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5tg3A (A:)
    adtivaveldsypntdigdpnyphigidiksvrskstarwnmqtgkvgtvhisynsvskr
    lsavvsysgsssttvsydvdlnnvlpewvrvglsattglykqtntilswsftsklktnsi
    adenslhfsfhkfsqnpkdlilqgdastdsdgnlqltkvsssgdpqgnsvgralfyapvh
    iweksavvasfdatftflikspdrepadgitffiantdttipsgsggrllglfpdan
    

    Sequence, based on observed residues (ATOM records): (download)
    >5tg3A (A:)
    adtivaveldsypntdigdpnyphigidiksvrskstarwnmqtgkvgtvhisynsvskr
    lsavvsysgsssttvsydvdlnnvlpewvrvglsattglykqtntilswsftsklknslh
    fsfhkfsqnpkdlilqgdastdsdgnlqltkvsssgdpqgnsvgralfyapvhiweksav
    vasfdatftflikspdrepadgitffiantdttipsgsggrllglfpdan
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >5tg3B (B:)
    adtivaveldsypntdigdpnyphigidiksvrskstarwnmqtgkvgtvhisynsvskr
    lsavvsysgsssttvsydvdlnnvlpewvrvglsattglykqtntilswsftsklktnsi
    adenslhfsfhkfsqnpkdlilqgdastdsdgnlqltkvsssgdpqgnsvgralfyapvh
    iweksavvasfdatftflikspdrepadgitffiantdttipsgsggrllglfpdan
    

    Sequence, based on observed residues (ATOM records): (download)
    >5tg3B (B:)
    adtivaveldsypntdigdpnyphigidiksvrskstarwnmqtgkvgtvhisynsvskr
    lsavvsysgsssttvsydvdlnnvlpewvrvglsattglykqtntilswsftsklknslh
    fsfhkfsqnpkdlilqgdastdsdgnlqltkvsssgdpqgnsvgralfyapvhiweksav
    vasfdatftflikspdrepadgitffiantdttipsgsggrllglfpdan
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >5tg3C (C:)
    adtivaveldsypntdigdpnyphigidiksvrskstarwnmqtgkvgtvhisynsvskr
    lsavvsysgsssttvsydvdlnnvlpewvrvglsattglykqtntilswsftsklktnsi
    adenslhfsfhkfsqnpkdlilqgdastdsdgnlqltkvsssgdpqgnsvgralfyapvh
    iweksavvasfdatftflikspdrepadgitffiantdttipsgsggrllglfpdan
    

    Sequence, based on observed residues (ATOM records): (download)
    >5tg3C (C:)
    adtivaveldsypntdigdpnyphigidiksvrskstarwnmqtgkvgtvhisynsvskr
    lsavvsysgsssttvsydvdlnnvlpewvrvglsattglykqtntilswsftsklknslh
    fsfhkfsqnpkdlilqgdastdsdgnlqltkvsssgdpqgnsvgralfyapvhiweksav
    vasfdatftflikspdrepadgitffiantdttipsgsggrllglfpdan
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >5tg3D (D:)
    adtivaveldsypntdigdpnyphigidiksvrskstarwnmqtgkvgtvhisynsvskr
    lsavvsysgsssttvsydvdlnnvlpewvrvglsattglykqtntilswsftsklktnsi
    adenslhfsfhkfsqnpkdlilqgdastdsdgnlqltkvsssgdpqgnsvgralfyapvh
    iweksavvasfdatftflikspdrepadgitffiantdttipsgsggrllglfpdan
    

    Sequence, based on observed residues (ATOM records): (download)
    >5tg3D (D:)
    adtivaveldsypntdigdpnyphigidiksvrskstarwnmqtgkvgtvhisynsvskr
    lsavvsysgsssttvsydvdlnnvlpewvrvglsattglykqtntilswsftsklknslh
    fsfhkfsqnpkdlilqgdastdsdgnlqltkvsssgdpqgnsvgralfyapvhiweksav
    vasfdatftflikspdrepadgitffiantdttipsgsggrllglfpdan