PDB entry 5td3

View 5td3 on RCSB PDB site
Description: Crystal structure of Catechol 1,2-dioxygenase from Burkholderia vietnamiensis
Class: oxidoreductase
Keywords: SSGCID, catechol 1, 2-dioxygenase, Burkholderia vietnamiensis, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, OXIDOREDUCTASE
Deposited on 2016-09-16, released 2016-11-02
The last revision prior to the SCOPe 2.07 freeze date was dated 2016-11-02, with a file datestamp of 2016-10-28.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: catechol 1,2-dioxygenase
    Species: Burkholderia vietnamiensis (strain G4 / LMG 22486) [TaxId:269482]
    Gene: Bcep1808_5824
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5td3a_
  • Chain 'B':
    Compound: catechol 1,2-dioxygenase
    Species: Burkholderia vietnamiensis (strain G4 / LMG 22486) [TaxId:269482]
    Gene: Bcep1808_5824
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5td3b_
  • Heterogens: ZN, MG, EDO, CL, PTY, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5td3A (A:)
mahhhhhhmsikvfetrevqdllkaassanangastgdartqqivlrllgdlfkaiddld
itpdevwagvnylnklgqdgeaallaaglglekyldirmdaadaalgldggtprtiegpl
yvagapvrdgvakidldadagagplvihgtvkdldgkpvagalvecwhanshgfyshfdp
tgaqrdfnlrgavrtgadgtyafrtlmpvgygcppqgatqqlldrlgrhgnrpahvhffv
tsdghrklttqfniegdpliwddfayatreelippvttktggaalglkadayqditfdfv
ltprvggadnqiverprasvaa

    Sequence, based on observed residues (ATOM records): (download) 
    >5td3A (A:)
ikvfetrevqdllkaassanastgdartqqivlrllgdlfkaiddlditpdevwagvnyl
nklgqdgeaallaaglglekyldirmdaadaalgldggtprtiegplyvagapvrdgvak
idldadagagplvihgtvkdldgkpvagalvecwhanshgfyshfdptgaqrdfnlrgav
rtgadgtyafrtlmpvgygcppqgatqqlldrlgrhgnrpahvhffvtsdghrklttqfn
iegdpliwddfayatreelippvttktggaalglkadayqditfdfvltprvggadnqiv
erprasv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5td3B (B:)
mahhhhhhmsikvfetrevqdllkaassanangastgdartqqivlrllgdlfkaiddld
itpdevwagvnylnklgqdgeaallaaglglekyldirmdaadaalgldggtprtiegpl
yvagapvrdgvakidldadagagplvihgtvkdldgkpvagalvecwhanshgfyshfdp
tgaqrdfnlrgavrtgadgtyafrtlmpvgygcppqgatqqlldrlgrhgnrpahvhffv
tsdghrklttqfniegdpliwddfayatreelippvttktggaalglkadayqditfdfv
ltprvggadnqiverprasvaa

    Sequence, based on observed residues (ATOM records): (download) 
    >5td3B (B:)
ikvfetrevqdllkaassanstgdartqqivlrllgdlfkaiddlditpdevwagvnyln
klgqdgeaallaaglglekyldirmdaadaalgldggtprtiegplyvagapvrdgvaki
dldadagagplvihgtvkdldgkpvagalvecwhanshgfyshfdptgaqrdfnlrgavr
tgadgtyafrtlmpvgygcppqgatqqlldrlgrhgnrpahvhffvtsdghrklttqfni
egdpliwddfayatreelippvttktggaalglkadayqditfdfvltprvadnqiverp
rasv