PDB entry 5t5v

View 5t5v on RCSB PDB site
Description: lipoxygenase-1 (soybean) at 293k
Class: oxidoreductase
Keywords: lipoxygenase, hydrogen tunneling, OXIDOREDUCTASE
Deposited on 2016-08-31, released 2017-09-06
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-09-27, with a file datestamp of 2017-09-22.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Seed linoleate 13S-lipoxygenase-1
    Species: Glycine max [TaxId:3847]
    Gene: LOX1.1, LOX1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P08170 (Start-838)
      • conflict (159)
    Domains in SCOPe 2.07: d5t5va1, d5t5va2
  • Chain 'B':
    Compound: Seed linoleate 13S-lipoxygenase-1
    Species: Glycine max [TaxId:3847]
    Gene: LOX1.1, LOX1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P08170 (Start-838)
      • conflict (159)
    Domains in SCOPe 2.07: d5t5vb1, d5t5vb2
  • Heterogens: FE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5t5vA (A:)
mfsaghkikgtvvlmpknelevnpdgsavdnlnaflgrsvslqlisatkadahgkgkvgk
dtflegintslptlgagesafnihfewdgsmgipgafyiknymqvefflksltleaisnq
gtirfvcnswvyntklyksvriffanhtyvpsetpaplveyreeelkslrgngtgerkey
driydydvyndlgnpdkseklarpvlggsstfpyprrgrtgrgptvtdpntekqgevfyv
prdenlghlkskdaleigtkslsqivqpafesafdlkstpiefhsfqdvhdlyeggiklp
rdvistiiplpvikelyrtdgqhilkfpqphvvqvsqsawmtdeefaremiagvnpcvir
gleefppksnldpaiygdqsskitadsldldgytmdealgsrrlfmldyhdifmpyvrqi
nqlnsaktyatrtilflredgtlkpvaielslphsagdlsaavsqvvlpakegvestiwl
lakayvivndscyhqlmshwlnthaamepfviathrhlsvlhpiyklltphyrnnmnina
larqslinangiiettflpskysvemssavyknwvftdqalpadlikrgvaikdpstphg
vrlliedypyaadgleiwaaiktwvqeyvplyyardddvkndselqhwwkeavekghgdl
kdkpwwpklqtledlvevcliiiwiasalhaavnfgqypygglimnrptasrrllpekgt
peyeeminnhekaylrtitsklptlislsvieilsthasdevylgqrdnphwtsdskalq
afqkfgnklkeieeklvrrnndpslqgnrlgpvqlpytllypsseegltfrgipnsisi

    Sequence, based on observed residues (ATOM records): (download) 
    >5t5vA (A:)
hkikgtvvlmpknelevvdnlnaflgrsvslqlisatkadahgkgkvgkdtflegintsl
ptlgagesafnihfewdgsmgipgafyiknymqvefflksltleaisnqgtirfvcnswv
yntklyksvriffanhtyvpsetpaplveyreeelkslrgngtgerkeydriydydvynd
lgnpdkseklarpvlggsstfpyprrgrtgrgptvtdpntekqgevfyvprdenlghlks
kdaleigtkslsqivqpafesafdlkstpiefhsfqdvhdlyeggiklprdvistiiplp
vikelyrtdgqhilkfpqphvvqvsqsawmtdeefaremiagvnpcvirgleefppksnl
dpaiygdqsskitadsldldgytmdealgsrrlfmldyhdifmpyvrqinqlnsaktyat
rtilflredgtlkpvaielslphvsqvvlpakegvestiwllakayvivndscyhqlmsh
wlnthaamepfviathrhlsvlhpiyklltphyrnnmninalarqslinangiiettflp
skysvemssavyknwvftdqalpadlikrgvaikdpstphgvrlliedypyaadgleiwa
aiktwvqeyvplyyardddvkndselqhwwkeavekghgdlkdkpwwpklqtledlvevc
liiiwiasalhaavnfgqypygglimnrptasrrllpekgtpeyeeminnhekaylrtit
sklptlislsvieilsthasdevylgqrdnphwtsdskalqafqkfgnklkeieeklvrr
nndpslqgnrlgpvqlpytllypsseegltfrgipnsisi

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5t5vB (B:)
mfsaghkikgtvvlmpknelevnpdgsavdnlnaflgrsvslqlisatkadahgkgkvgk
dtflegintslptlgagesafnihfewdgsmgipgafyiknymqvefflksltleaisnq
gtirfvcnswvyntklyksvriffanhtyvpsetpaplveyreeelkslrgngtgerkey
driydydvyndlgnpdkseklarpvlggsstfpyprrgrtgrgptvtdpntekqgevfyv
prdenlghlkskdaleigtkslsqivqpafesafdlkstpiefhsfqdvhdlyeggiklp
rdvistiiplpvikelyrtdgqhilkfpqphvvqvsqsawmtdeefaremiagvnpcvir
gleefppksnldpaiygdqsskitadsldldgytmdealgsrrlfmldyhdifmpyvrqi
nqlnsaktyatrtilflredgtlkpvaielslphsagdlsaavsqvvlpakegvestiwl
lakayvivndscyhqlmshwlnthaamepfviathrhlsvlhpiyklltphyrnnmnina
larqslinangiiettflpskysvemssavyknwvftdqalpadlikrgvaikdpstphg
vrlliedypyaadgleiwaaiktwvqeyvplyyardddvkndselqhwwkeavekghgdl
kdkpwwpklqtledlvevcliiiwiasalhaavnfgqypygglimnrptasrrllpekgt
peyeeminnhekaylrtitsklptlislsvieilsthasdevylgqrdnphwtsdskalq
afqkfgnklkeieeklvrrnndpslqgnrlgpvqlpytllypsseegltfrgipnsisi

    Sequence, based on observed residues (ATOM records): (download) 
    >5t5vB (B:)
ghkikgtvvlmpknelevnlnaflgrsvslqlisatkadahgkgkvgkdtflegintslp
tlgagesafnihfewdgsmgipgafyiknymqvefflksltleaisnqgtirfvcnswvy
ntklyksvriffanhtyvpsetpaplveyreeelkslrgngtgerkeydriydydvyndl
gnpdkseklarpvlggsstfpyprrgrtgrgptvtdpntekqgevfyvprdenlghlksk
daleigtkslsqivqpafesafdlkstpiefhsfqdvhdlyeggiklprdvistiiplpv
ikelyrtdgqhilkfpqphvvqvsqsawmtdeefaremiagvnpcvirgleefppksnld
paiygdqsskitadsldldgytmdealgsrrlfmldyhdifmpyvrqinqlnsaktyatr
tilflredgtlkpvaielslphavsqvvlpakegvestiwllakayvivndscyhqlmsh
wlnthaamepfviathrhlsvlhpiyklltphyrnnmninalarqslinangiiettflp
skysvemssavyknwvftdqalpadlikrgvaikdpstphgvrlliedypyaadgleiwa
aiktwvqeyvplyyardddvkndselqhwwkeavekghgdlkdkpwwpklqtledlvevc
liiiwiasalhaavnfgqypygglimnrptasrrllpekgtpeyeeminnhekaylrtit
sklptlislsvieilsthasdevylgqrdnphwtsdskalqafqkfgnklkeieeklvrr
nndpslqgnrlgpvqlpytllypsseegltfrgipnsisi