PDB entry 5syl

View 5syl on RCSB PDB site
Description: B. pseudomallei KatG with KCN bound
Class: oxidoreductase
Keywords: catalase-peroxidase, oxidoreductase, KatG, cyanide
Deposited on 2016-08-11, released 2016-09-07
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-09-27, with a file datestamp of 2017-09-22.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Catalase-peroxidase
    Species: Burkholderia pseudomallei (strain 1710b) [TaxId:320372]
    Gene: katG, BURPS1710b_3366
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5syla1, d5syla2
  • Chain 'B':
    Compound: Catalase-peroxidase
    Species: Burkholderia pseudomallei (strain 1710b) [TaxId:320372]
    Gene: katG, BURPS1710b_3366
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5sylb1, d5sylb2
  • Heterogens: NA, CL, HEM, CYN, MPD, PO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5sylA (A:)
msneakcpfhqaagngtsnrdwwpnqldlsilhrhsslsdpmgkdfnyaqafekldlaav
krdlhalmttsqdwwpadfghygglfirmawhsagtyrtadgrggagegqqrfaplnswp
dnanldkarrllwpikqkygraiswadlliltgnvalesmgfktfgfaggradtwepedv
ywgsekiwlelsggpnsrysgdrqlenplaavqmgliyvnpegpdgnpdpvaaardirdt
farmamndeetvaliagghtfgkthgagpasnvgaepeaagieaqglgwksayrtgkgad
aitsglevtwtttptqwshnffenlfgyeweltkspagahqwvakgadavipdafdpskk
hrptmlttdlslrfdpayekisrrfhenpeqfadafarawfklthrdmgprarylgpevp
aevllwqdpipavdhplidaadaaelkakvlasgltvsqlvstawaaastfrgsdkrgga
ngarirlapqkdweanqpeqlaavletleairtafngaqrggkqvsladlivlagcagve
qaaknaghavtvpfapgradasqeqtdvesmavlepvadgfrnylkgkyrvpaevllvdk
aqlltlsapemtvllgglrvlganvgqsrhgvftareqaltndffvnlldmgtewkptaa
dadvfegrdratgelkwtgtrvdlvfgshsqlralaevygsadaqekfvrdfvavwnkvm
nldrfdla

    Sequence, based on observed residues (ATOM records): (download) 
    >5sylA (A:)
gtsnrdwwpnqldlsilhrhsslsdpmgkdfnyaqafekldlaavkrdlhalmttsqdww
padfghygglfirmawhsagtyrtadgrggagegqqrfaplnswpdnanldkarrllwpi
kqkygraiswadlliltgnvalesmgfktfgfaggradtwepedvywgsekiwlelsggp
nsrysgdrqlenplaavqmgliyvnpegpdgnpdpvaaardirdtfarmamndeetvali
agghtfgkthgagpasnvgaepeaagieaqglgwksayrtgkgadaitsglevtwtttpt
qwshnffenlfgyeweltkspagahqwvakgadavipdafdpskkhrptmlttdlslrfd
payekisrrfhenpeqfadafarawfklthrdmgprarylgpevpaevllwqdpipavdh
plidaadaaelkakvlasgltvsqlvstawaaastfrgsdkrggangarirlapqkdwea
nqpeqlaavletleairtafngaqrggkqvsladlivlagcagveqaaknaghavtvpfa
pgradasqeqtdvesmavlepvadgfrnylkgkyrvpaevllvdkaqlltlsapemtvll
gglrvlganvgqsrhgvftareqaltndffvnlldmgtewkptaadadvfegrdratgel
kwtgtrvdlvfgshsqlralaevygsadaqekfvrdfvavwnkvmnldrfdla

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5sylB (B:)
msneakcpfhqaagngtsnrdwwpnqldlsilhrhsslsdpmgkdfnyaqafekldlaav
krdlhalmttsqdwwpadfghygglfirmawhsagtyrtadgrggagegqqrfaplnswp
dnanldkarrllwpikqkygraiswadlliltgnvalesmgfktfgfaggradtwepedv
ywgsekiwlelsggpnsrysgdrqlenplaavqmgliyvnpegpdgnpdpvaaardirdt
farmamndeetvaliagghtfgkthgagpasnvgaepeaagieaqglgwksayrtgkgad
aitsglevtwtttptqwshnffenlfgyeweltkspagahqwvakgadavipdafdpskk
hrptmlttdlslrfdpayekisrrfhenpeqfadafarawfklthrdmgprarylgpevp
aevllwqdpipavdhplidaadaaelkakvlasgltvsqlvstawaaastfrgsdkrgga
ngarirlapqkdweanqpeqlaavletleairtafngaqrggkqvsladlivlagcagve
qaaknaghavtvpfapgradasqeqtdvesmavlepvadgfrnylkgkyrvpaevllvdk
aqlltlsapemtvllgglrvlganvgqsrhgvftareqaltndffvnlldmgtewkptaa
dadvfegrdratgelkwtgtrvdlvfgshsqlralaevygsadaqekfvrdfvavwnkvm
nldrfdla

    Sequence, based on observed residues (ATOM records): (download) 
    >5sylB (B:)
gtsnrdwwpnqldlsilhrhsslsdpmgkdfnyaqafekldlaavkrdlhalmttsqdww
padfghygglfirmawhsagtyrtadgrggagegqqrfaplnswpdnanldkarrllwpi
kqkygraiswadlliltgnvalesmgfktfgfaggradtwepedvywgsekiwlelsggp
nsrysgdrqlenplaavqmgliyvnpegpdgnpdpvaaardirdtfarmamndeetvali
agghtfgkthgagpasnvgaepeaagieaqglgwksayrtgkgadaitsglevtwtttpt
qwshnffenlfgyeweltkspagahqwvakgadavipdafdpskkhrptmlttdlslrfd
payekisrrfhenpeqfadafarawfklthrdmgprarylgpevpaevllwqdpipavdh
plidaadaaelkakvlasgltvsqlvstawaaastfrgsdkrggangarirlapqkdwea
nqpeqlaavletleairtafngaqrggkqvsladlivlagcagveqaaknaghavtvpfa
pgradasqeqtdvesmavlepvadgfrnylkgkyrvpaevllvdkaqlltlsapemtvll
gglrvlganvgqsrhgvftareqaltndffvnlldmgtewkptaadadvfegrdratgel
kwtgtrvdlvfgshsqlralaevygsadaqekfvrdfvavwnkvmnldrfdla