PDB entry 5syk

View 5syk on RCSB PDB site
Description: Crystal structure of B. pseudomallei KatG treated with hydrogen peroxide
Class: oxidoreductase
Keywords: catalase-peroxidase, KatG, hydrogen peroxide, oxidreductase, INH, oxidoreductase
Deposited on 2016-08-11, released 2016-09-21
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-09-27, with a file datestamp of 2017-09-22.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Catalase-peroxidase
    Species: Burkholderia pseudomallei (strain 1710b) [TaxId:320372]
    Gene: katG, BURPS1710b_3366
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5syka1, d5syka2
  • Chain 'B':
    Compound: Catalase-peroxidase
    Species: Burkholderia pseudomallei (strain 1710b) [TaxId:320372]
    Gene: katG, BURPS1710b_3366
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5sykb1, d5sykb2
  • Heterogens: HEM, NA, CL, OXY, MRD, MPD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5sykA (A:)
msneakcpfhqaagngtsnrdwwpnqldlsilhrhsslsdpmgkdfnyaqafekldlaav
krdlhalmttsqdwwpadfghygglfirmawhsagtyrtadgrggagegqqrfaplnswp
dnanldkarrllwpikqkygraiswadlliltgnvalesmgfktfgfaggradtwepedv
ywgsekiwlelsggpnsrysgdrqlenplaavqmgliyvnpegpdgnpdpvaaardirdt
farmamndeetvaliagghtfgkthgagpasnvgaepeaagieaqglgwksayrtgkgad
aitsglevtwtttptqwshnffenlfgyeweltkspagahqwvakgadavipdafdpskk
hrptmlttdlslrfdpayekisrrfhenpeqfadafarawfklthrdmgprarylgpevp
aevllwqdpipavdhplidaadaaelkakvlasgltvsqlvstawaaastfrgsdkrgga
ngarirlapqkdweanqpeqlaavletleairtafngaqrggkqvsladlivlagcagve
qaaknaghavtvpfapgradasqeqtdvesmavlepvadgfrnylkgkyrvpaevllvdk
aqlltlsapemtvllgglrvlganvgqsrhgvftareqaltndffvnlldmgtewkptaa
dadvfegrdratgelkwtgtrvdlvfgshsqlralaevygsadaqekfvrdfvavwnkvm
nldrfdla

    Sequence, based on observed residues (ATOM records): (download) 
    >5sykA (A:)
gtsnrdwwpnqldlsilhrhsslsdpmgkdfnyaqafekldlaavkrdlhalmttsqdww
padfghygglfirmawhsagtyrtadgrggagegqqrfaplnswpdnanldkarrllwpi
kqkygraiswadlliltgnvalesmgfktfgfaggradtwepedvywgsekiwlelsggp
nsrysgdrqlenplaavqmgliyvnpegpdgnpdpvaaardirdtfarmamndeetvali
agghtfgkthgagpasnvgaepeaagieaqglgwksayrtgkgadaitsglevtwtttpt
qwshnffenlfgyeweltkspagahqwvakgadavipdafdpskkhrptmlttdlslrfd
payekisrrfhenpeqfadafarawfklthrdmgprarylgpevpaevllwqdpipavdh
plidaadaaelkakvlasgltvsqlvstawaaastfrgsdkrggangarirlapqkdwea
nqpeqlaavletleairtafngaqrggkqvsladlivlagcagveqaaknaghavtvpfa
pgradasqeqtdvesmavlepvadgfrnylkgkyrvpaevllvdkaqlltlsapemtvll
gglrvlganvgqsrhgvftareqaltndffvnlldmgtewkptaadadvfegrdratgel
kwtgtrvdlvfgshsqlralaevygsadaqekfvrdfvavwnkvmnldrfdla

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5sykB (B:)
msneakcpfhqaagngtsnrdwwpnqldlsilhrhsslsdpmgkdfnyaqafekldlaav
krdlhalmttsqdwwpadfghygglfirmawhsagtyrtadgrggagegqqrfaplnswp
dnanldkarrllwpikqkygraiswadlliltgnvalesmgfktfgfaggradtwepedv
ywgsekiwlelsggpnsrysgdrqlenplaavqmgliyvnpegpdgnpdpvaaardirdt
farmamndeetvaliagghtfgkthgagpasnvgaepeaagieaqglgwksayrtgkgad
aitsglevtwtttptqwshnffenlfgyeweltkspagahqwvakgadavipdafdpskk
hrptmlttdlslrfdpayekisrrfhenpeqfadafarawfklthrdmgprarylgpevp
aevllwqdpipavdhplidaadaaelkakvlasgltvsqlvstawaaastfrgsdkrgga
ngarirlapqkdweanqpeqlaavletleairtafngaqrggkqvsladlivlagcagve
qaaknaghavtvpfapgradasqeqtdvesmavlepvadgfrnylkgkyrvpaevllvdk
aqlltlsapemtvllgglrvlganvgqsrhgvftareqaltndffvnlldmgtewkptaa
dadvfegrdratgelkwtgtrvdlvfgshsqlralaevygsadaqekfvrdfvavwnkvm
nldrfdla

    Sequence, based on observed residues (ATOM records): (download) 
    >5sykB (B:)
gtsnrdwwpnqldlsilhrhsslsdpmgkdfnyaqafekldlaavkrdlhalmttsqdww
padfghygglfirmawhsagtyrtadgrggagegqqrfaplnswpdnanldkarrllwpi
kqkygraiswadlliltgnvalesmgfktfgfaggradtwepedvywgsekiwlelsggp
nsrysgdrqlenplaavqmgliyvnpegpdgnpdpvaaardirdtfarmamndeetvali
agghtfgkthgagpasnvgaepeaagieaqglgwksayrtgkgadaitsglevtwtttpt
qwshnffenlfgyeweltkspagahqwvakgadavipdafdpskkhrptmlttdlslrfd
payekisrrfhenpeqfadafarawfklthrdmgprarylgpevpaevllwqdpipavdh
plidaadaaelkakvlasgltvsqlvstawaaastfrgsdkrggangarirlapqkdwea
nqpeqlaavletleairtafngaqrggkqvsladlivlagcagveqaaknaghavtvpfa
pgradasqeqtdvesmavlepvadgfrnylkgkyrvpaevllvdkaqlltlsapemtvll
gglrvlganvgqsrhgvftareqaltndffvnlldmgtewkptaadadvfegrdratgel
kwtgtrvdlvfgshsqlralaevygsadaqekfvrdfvavwnkvmnldrfdla