PDB entry 5svv

View 5svv on RCSB PDB site
Description: Structure and kinetics of the LOV domain of ZEITLUPE determine its circadian function in Arabidopsis
Class: circadian clock protein
Keywords: LOV, Kinetics, PAS domain, photoreceptor, CIRCADIAN CLOCK PROTEIN
Deposited on 2016-08-07, released 2017-03-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-25, with a file datestamp of 2019-12-20.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Adagio protein 1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ADO1, FKL2, LKP1, ZTL, At5g57360, MSF19.2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q94BT6
      • engineered mutation (19)
      • engineered mutation (51)
    Domains in SCOPe 2.08: d5svva_
  • Chain 'B':
    Compound: Adagio protein 1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ADO1, FKL2, LKP1, ZTL, At5g57360, MSF19.2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q94BT6 (Start-136)
      • engineered mutation (19)
      • engineered mutation (51)
    Domains in SCOPe 2.08: d5svvb_
  • Chain 'C':
    Compound: Adagio protein 1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ADO1, FKL2, LKP1, ZTL, At5g57360, MSF19.2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q94BT6 (Start-136)
      • engineered mutation (19)
      • engineered mutation (51)
    Domains in SCOPe 2.08: d5svvc_
  • Chain 'D':
    Compound: Adagio protein 1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ADO1, FKL2, LKP1, ZTL, At5g57360, MSF19.2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q94BT6
      • engineered mutation (19)
      • engineered mutation (51)
    Domains in SCOPe 2.08: d5svvd_
  • Heterogens: FMN, ACT, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5svvA (A:)
ggpipypvgnllhtapcgfivtdavepdqpiiyvntvfemvtgyraeevlgrncrflqcr
gpfakrrhplvdsmvvseirkcidegiefqgellnfrkdgsplmnrlrltpiygdddtit
hiigiqffietdidlgp

    Sequence, based on observed residues (ATOM records): (download) 
    >5svvA (A:)
tapcgfivtdavepdqpiiyvntvfemvtgyraeevlgrncrflqcrgpfakrrhplvds
mvvseirkcidegiefqgellnfrkdgsplmnrlrltpiygdddtithiigiqffi

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5svvB (B:)
ggpipypvgnllhtapcgfivtdavepdqpiiyvntvfemvtgyraeevlgrncrflqcr
gpfakrrhplvdsmvvseirkcidegiefqgellnfrkdgsplmnrlrltpiygdddtit
hiigiqffietdidlgp

    Sequence, based on observed residues (ATOM records): (download) 
    >5svvB (B:)
pipypvgnllhtapcgfivtdavepdqpiiyvntvfemvtgyraeevlgrncrflqcrgp
fakrrhplvdsmvvseirkcidegiefqgellnfrkdgsplmnrlrltpiygdddtithi
igiqffietdidlgp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5svvC (C:)
ggpipypvgnllhtapcgfivtdavepdqpiiyvntvfemvtgyraeevlgrncrflqcr
gpfakrrhplvdsmvvseirkcidegiefqgellnfrkdgsplmnrlrltpiygdddtit
hiigiqffietdidlgp

    Sequence, based on observed residues (ATOM records): (download) 
    >5svvC (C:)
pcgfivtdavepdqpiiyvntvfemvtgyraeevlgrncrflqcrgpfakrrhplvdsmv
vseirkcidegiefqgellnfrkdgsplmnrlrltpiygdddtithiigiqffietdidl
gp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5svvD (D:)
ggpipypvgnllhtapcgfivtdavepdqpiiyvntvfemvtgyraeevlgrncrflqcr
gpfakrrhplvdsmvvseirkcidegiefqgellnfrkdgsplmnrlrltpiygdddtit
hiigiqffietdidlgp

    Sequence, based on observed residues (ATOM records): (download) 
    >5svvD (D:)
pcgfivtdavepdqpiiyvntvfemvtgyraeevlgrncrflqcrgpfakrrhplvdsmv
vseirkcidegiefqgellnfrkdgsplmnrlrltpiygdddtithiigiqffietdidl