PDB entry 5svu

View 5svu on RCSB PDB site
Description: Structure and kinetics of the LOV domain of ZEITLUPE determine its circadian function in Arabidopsis
Class: circadian clock protein
Keywords: LOV, Kinetics, PAS domain, photoreceptor, CIRCADIAN CLOCK PROTEIN
Deposited on 2016-08-07, released 2017-03-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-25, with a file datestamp of 2019-12-20.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Adagio protein 1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ADO1, FKL2, LKP1, ZTL, At5g57360, MSF19.2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q94BT6
      • engineered mutation (51)
    Domains in SCOPe 2.08: d5svua_
  • Chain 'B':
    Compound: Adagio protein 1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ADO1, FKL2, LKP1, ZTL, At5g57360, MSF19.2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q94BT6 (Start-136)
      • engineered mutation (51)
    Domains in SCOPe 2.08: d5svub_
  • Chain 'C':
    Compound: Adagio protein 1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ADO1, FKL2, LKP1, ZTL, At5g57360, MSF19.2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q94BT6 (Start-136)
      • engineered mutation (51)
    Domains in SCOPe 2.08: d5svuc_
  • Chain 'D':
    Compound: Adagio protein 1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ADO1, FKL2, LKP1, ZTL, At5g57360, MSF19.2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q94BT6
      • engineered mutation (51)
    Domains in SCOPe 2.08: d5svud_
  • Heterogens: FMN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5svuA (A:)
ggpipypvgnllhtapcgfvvtdavepdqpiiyvntvfemvtgyraeevlgrncrflqcr
gpfakrrhplvdsmvvseirkcidegiefqgellnfrkdgsplmnrlrltpiygdddtit
hiigiqffietdidlgp

    Sequence, based on observed residues (ATOM records): (download) 
    >5svuA (A:)
htapcgfvvtdavepdqpiiyvntvfemvtgyraeevlgrncrflqcrgpfakrrhplvd
smvvseirkcidegiefqgellnfrkdgsplmnrlrltpiygdddtithiigiqffietd
i

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5svuB (B:)
ggpipypvgnllhtapcgfvvtdavepdqpiiyvntvfemvtgyraeevlgrncrflqcr
gpfakrrhplvdsmvvseirkcidegiefqgellnfrkdgsplmnrlrltpiygdddtit
hiigiqffietdidlgp

    Sequence, based on observed residues (ATOM records): (download) 
    >5svuB (B:)
pipypvgnllhtapcgfvvtdavepdqpiiyvntvfemvtgyraeevlgrncrflqcrgp
fakrrhplvdsmvvseirkcidegiefqgellnfrkdgsplmnrlrltpiygdddtithi
igiqffietdidlgp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5svuC (C:)
ggpipypvgnllhtapcgfvvtdavepdqpiiyvntvfemvtgyraeevlgrncrflqcr
gpfakrrhplvdsmvvseirkcidegiefqgellnfrkdgsplmnrlrltpiygdddtit
hiigiqffietdidlgp

    Sequence, based on observed residues (ATOM records): (download) 
    >5svuC (C:)
pcgfvvtdavepdqpiiyvntvfemvtgyraeevlgrncrflqcrgpfakrrhplvdsmv
vseirkcidegiefqgellnfrkdgsplmnrlrltpiygdddtithiigiqffietdidl
gp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5svuD (D:)
ggpipypvgnllhtapcgfvvtdavepdqpiiyvntvfemvtgyraeevlgrncrflqcr
gpfakrrhplvdsmvvseirkcidegiefqgellnfrkdgsplmnrlrltpiygdddtit
hiigiqffietdidlgp

    Sequence, based on observed residues (ATOM records): (download) 
    >5svuD (D:)
pcgfvvtdavepdqpiiyvntvfemvtgyraeevlgrncrflqcrgpfakrrhplvdsmv
vseirkcidegiefqgellnfrkdgsplmnrlrltpiygdddtithiigiqffietdidl