PDB entry 5sv3
View 5sv3 on RCSB PDB site
Description: RTA1-33/44-198 (RVEC) bound to Single Domain Antibody A3C8
Class: toxin
Keywords: Ricin, A-chain, RVEC, sdAb, antibody, RTA1-33/44-198, TOXIN
Deposited on
2016-08-04, released
2016-10-19
The last revision prior to the SCOPe 2.06 freeze date was dated
2016-10-19, with a file datestamp of
2016-10-14.
Experiment type: XRAY
Resolution: 2.73 Å
R-factor: N/A
AEROSPACI score: 0.17
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Anti-Ricin A-chain Single Domain Antibody (sdAb) A3C8
Species: Lama glama [TaxId:9844]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5sv3a_ - Chain 'B':
Compound: ricin
Species: Ricinus communis [TaxId:3988]
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: Anti-Ricin A-chain Single Domain Antibody (sdAb) A3C8
Species: Lama glama [TaxId:9844]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5sv3c_ - Chain 'D':
Compound: ricin
Species: Ricinus communis [TaxId:3988]
Database cross-references and differences (RAF-indexed):
- Heterogens: SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5sv3A (A:)
maevqlvesggglvqagdslrlsctasgrtlgdygvawfrqapgkerefvsvisrstiit
dyadsvrgrfsisadsakntvylqmnslkpedtavyycavianpvyatsrnsddyghwgq
gtqvtvssaaalehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>5sv3A (A:)
evqlvesggglvqagdslrlsctasgrtlgdygvawfrqapgkerefvsvisrstiitdy
adsvrgrfsisadsakntvylqmnslkpedtavyycavianpvyatsrnsddyghwgqgt
qvtvss
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>5sv3C (C:)
maevqlvesggglvqagdslrlsctasgrtlgdygvawfrqapgkerefvsvisrstiit
dyadsvrgrfsisadsakntvylqmnslkpedtavyycavianpvyatsrnsddyghwgq
gtqvtvssaaalehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>5sv3C (C:)
vqlvesggglvqagdslrlsctasgrtlgdygvawfrqapgkerefvsvisrstiitdya
dsvrgrfsisadsakntvylqmnslkpedtavyycavianpvyatsrnsddyghwgqgtq
vtvss
- Chain 'D':
No sequence available.