PDB entry 5sth
View 5sth on RCSB PDB site
Description: PanDDA analysis group deposition -- Aar2/RNaseH in complex with fragment P02H09 from the F2X-Universal Library
Class: splicing
Keywords: FRAGMAX, FRAGMAXAPP, fragment screening, RNaseH like domain, U5 SNRNP assembly, SPLICING
Deposited on
2022-08-26, released
2022-11-02
The last revision prior to the SCOPe 2.08 freeze date was dated
2022-11-30, with a file datestamp of
2022-11-25.
Experiment type: XRAY
Resolution: 1.67 Å
R-factor: N/A
AEROSPACI score: 0.5
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Pre-mRNA-splicing factor 8
Species: Saccharomyces cerevisiae S288C [TaxId:559292]
Gene: PRP8, DBF3, DNA39, RNA8, SLT21, USA2, YHR165C
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: A1 cistron-splicing factor AAR2
Species: Saccharomyces cerevisiae S288C [TaxId:559292]
Gene: AAR2, YBL074C, YBL06.06, YBL0611
Database cross-references and differences (RAF-indexed):
- Uniprot P32357 (4-307)
- expression tag (0-3)
- conflict (156-157)
- conflict (160)
Domains in SCOPe 2.08: d5sthb1, d5sthb2 - Heterogens: 8K2, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5sthB (B:)
gamamntvpftsapievtigidqysfnvkenqpfhgikdipighvhvihfqhadnssmry
gywfdcrmgnfyiqydpkdglykmmeerdgakfenivhnfkerqmmvsypkideddtwyn
ltefvqmdkirkivrkdenqfsyvdssmttvqenelsssssdpahslnytvinfksreai
rpghemedfldksyylntvmlqgifknssnyfgelqfaflnamffgnygsslqwhamiel
icssatvpkhmldkldeilyyqiktlpeqysdillnervwniclyssfqknslhntekim
enkypell
Sequence, based on observed residues (ATOM records): (download)
>5sthB (B:)
mntvpftsapievtigidqysfnvkenqpfhgikdipighvhvihfqhadnssmrygywf
dcrmgnfyiqydpkdglykmmeerdgakfenivhnfkerqmmvsypkideddtwynltef
vqmdkirkivrkdenqfsyvdssmttvqenelsdpahslnytvinfksreairpghemed
fldksyylntvmlqgifknssnyfgelqfaflnamffgnygsslqwhamielicssatvp
khmldkldeilyyqiktlpeqysdillnervwniclyssfqknslhntekimenkypell