PDB entry 5rga

View 5rga on RCSB PDB site
Description: Crystal Structure of Kemp Eliminase HG3 with bound transition state analogue, 277K
Class: hydrolase
Keywords: Hydrolase
Deposited on 2020-04-08, released 2020-07-22
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-05-12, with a file datestamp of 2021-05-07.
Experiment type: XRAY
Resolution: 1.86 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Kemp Eliminase HG3
    Species: THERMOASCUS AURANTIACUS [TaxId:5087]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P23360 (Start-304)
      • engineered mutation (43)
      • engineered mutation (45)
      • engineered mutation (82)
      • engineered mutation (84-85)
      • engineered mutation (131)
      • engineered mutation (173)
      • engineered mutation (235)
      • engineered mutation (237-238)
      • engineered mutation (268)
    Domains in SCOPe 2.08: d5rgaa_
  • Chain 'B':
    Compound: Kemp Eliminase HG3
    Species: THERMOASCUS AURANTIACUS [TaxId:5087]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P23360 (Start-304)
      • engineered mutation (43)
      • engineered mutation (45)
      • engineered mutation (82)
      • engineered mutation (84-85)
      • engineered mutation (131)
      • engineered mutation (173)
      • engineered mutation (235)
      • engineered mutation (237-238)
      • engineered mutation (268)
    Domains in SCOPe 2.08: d5rgab_
  • Heterogens: 6NT, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5rgaA (A:)
    maeaaqsvdqlikargkvyfgvatdqnrlttgknaaiiqadfgmvwpensmkwdatepsq
    gnfnfagadylvnwaqqngkligggmlvwhsqlpswvssitdkntltnvmknhittlmtr
    ykgkirawdvvgeafnedgslrqtvflnvigedyipiafqtaraadpnaklyimdynlds
    asypktqaivnrvkqwraagvpidgigsqthlsagqgagvlqalpllasagtpevsilml
    dvagasptdyvnvvnaclnvqscvgitvfgvadpdswrasttpllfdgnfnpkpaynaiv
    qdlqqgsiegrghhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >5rgaA (A:)
    aqsvdqlikargkvyfgvatdqnrlttgknaaiiqadfgmvwpensmkwdatepsqgnfn
    fagadylvnwaqqngkligggmlvwhsqlpswvssitdkntltnvmknhittlmtrykgk
    irawdvvgeafnedgslrqtvflnvigedyipiafqtaraadpnaklyimdynldsasyp
    ktqaivnrvkqwraagvpidgigsqthlsagqgagvlqalpllasagtpevsilmldvag
    asptdyvnvvnaclnvqscvgitvfgvadpdswrasttpllfdgnfnpkpaynaivqdlq
    q
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >5rgaB (B:)
    maeaaqsvdqlikargkvyfgvatdqnrlttgknaaiiqadfgmvwpensmkwdatepsq
    gnfnfagadylvnwaqqngkligggmlvwhsqlpswvssitdkntltnvmknhittlmtr
    ykgkirawdvvgeafnedgslrqtvflnvigedyipiafqtaraadpnaklyimdynlds
    asypktqaivnrvkqwraagvpidgigsqthlsagqgagvlqalpllasagtpevsilml
    dvagasptdyvnvvnaclnvqscvgitvfgvadpdswrasttpllfdgnfnpkpaynaiv
    qdlqqgsiegrghhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >5rgaB (B:)
    aqsvdqlikargkvyfgvatdqnrlttgknaaiiqadfgmvwpensmkwdatepsqgnfn
    fagadylvnwaqqngkligggmlvwhsqlpswvssitdkntltnvmknhittlmtrykgk
    irawdvvgeafnedgslrqtvflnvigedyipiafqtaraadpnaklyimdynldsasyp
    ktqaivnrvkqwraagvpidgigsqthlsagqgagvlqalpllasagtpevsilmldvag
    asptdyvnvvnaclnvqscvgitvfgvadpdswrasttpllfdgnfnpkpaynaivqdlq
    q