PDB entry 5qzc
View 5qzc on RCSB PDB site
Description: PanDDA analysis group deposition -- Auto-refined data of Aar2/RNaseH for ground state model 27
Class: splicing
Keywords: FragMAX, FragMAXapp, fragment screening, RNaseH like domain, VHS like domain, U5 snRNP assembly, SPLICING, F2X-Entry
Deposited on
2020-03-29, released
2020-06-10
The last revision prior to the SCOPe 2.07 freeze date was dated
2020-06-10, with a file datestamp of
2020-06-05.
Experiment type: XRAY
Resolution: 1.72 Å
R-factor: N/A
AEROSPACI score: 0.39
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Pre-mRNA-splicing factor 8
Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
Gene: PRP8, DBF3, DNA39, RNA8, SLT21, USA2, YHR165C
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5qzca1, d5qzca2 - Chain 'B':
Compound: A1 cistron-splicing factor AAR2
Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
Gene: AAR2, YBL074C, YBL06.06, YBL0611
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d5qzcb1, d5qzcb2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5qzcA (A:)
gamnssnyaelfnndiklfvddtnvyrvtvhktfegnvatkaingciftlnpktghlflk
iihtsvwagqkrlsqlakwktaeevsalvrslpkeeqpkqiivtrkamldplevhmldfp
niairptelrlpfsaamsidklsdvvmkatepqmvlfniyddwldrissytafsrltlll
ralktneesakmillsdptitiksyhlwpsftdeqwitiesqmrdlilteygrkynvnis
altqteikdiilgqnika
Sequence, based on observed residues (ATOM records): (download)
>5qzcA (A:)
gamnssnyaelfnndiklfvddtnvyrvtvhktfegnvatkaingciftlnpktghlflk
iihtsvwagqkrlsqlakwktaeevsalvrslpkeeqpkqiivtrkamldplevhmldfp
niairptelrlpfsaamsidklsdvvmkatepqmvlfniyddwldrissytafsrltlll
ralktneesakmillsdptitiksyhlwpsftdeqwitiesqmrdlilteygrkynv
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5qzcB (B:)
gamamntvpftsapievtigidqysfnvkenqpfhgikdipighvhvihfqhadnssmry
gywfdcrmgnfyiqydpkdglykmmeerdgakfenivhnfkerqmmvsypkideddtwyn
ltefvqmdkirkivrkdenqfsyvdssmttvqenelsssssdpahslnytvinfksreai
rpghemedfldksyylntvmlqgifknssnyfgelqfaflnamffgnygsslqwhamiel
icssatvpkhmldkldeilyyqiktlpeqysdillnervwniclyssfqknslhntekim
enkypell
Sequence, based on observed residues (ATOM records): (download)
>5qzcB (B:)
mntvpftsapievtigidqysfnvkenqpfhgikdipighvhvihfqhadnssmrygywf
dcrmgnfyiqydpkdglykmmeerdgakfenivhnfkerqmmvsypkideddtwynltef
vqmdkirkivrkdenqfsyvdssmttvqenelsdpahslnytvinfksreairpghemed
fldksyylntvmlqgifknssnyfgelqfaflnamffgnygsslqwhamielicssatvp
khmldkldeilyyqiktlpeqysdillnervwniclyssfqknslhntekimenkypell