PDB entry 5oyl
View 5oyl on RCSB PDB site
Description: vsv g cr2
Class: viral protein
Keywords: c, VIRAL PROTEIN
Deposited on
2017-09-11, released
2018-03-21
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-06-29.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: N/A
AEROSPACI score: 0.32
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Glycoprotein
Species: Recombinant vesicular stomatitis Indiana virus rVSV-G/GFP [TaxId:582817]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5oyla_ - Chain 'D':
Compound: low-density lipoprotein receptor
Species: Homo sapiens [TaxId:9606]
Gene: LDLR
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5oyld1, d5oyld2 - Heterogens: NAG, CA, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>5oylA (A:)
kftivfphnqkgnwknvpsnyhycpsssdlnwhndligtalqvkmpkshkaiqadgwmch
askwvttcdfrwygpkyithsirsftpsveqckesieqtkqgtwlnpgfppqscgyatvt
daeavivqvtphhvlvdeytgewvdsqfingkcsnyicptvhnsttwhsdykvkglcdsn
lismditffsedgelsslgkegtgfrsnyfayetggkackmqyckhwgvrlpsgvwfema
dkdlfaaarfpecpegssisapsqtsvdvsliqdverildyslcqetwskiraglpispv
dlsylapknpgtgpaftiingtlkyfetryirvdiaapilsrmvgmisgttterelwddw
apyedveigpngvlrtssgykfplymighgmldsdlhlsskaqvfehphi
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>5oylD (D:)
gplgsvtcksgdfscggrvnrcipqfwrcdgqvdcdngsdeqgcpp