PDB entry 5ova

View 5ova on RCSB PDB site
Description: Apo PDZ domain from rat Shank3
Class: protein binding
Keywords: PDZ domain, peptide binding, post-synaptic density, PROTEIN BINDING
Deposited on 2017-08-28, released 2018-03-07
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-03-07, with a file datestamp of 2018-03-02.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: SH3 and multiple ankyrin repeat domains protein 3
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Shank3, Prosap2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9JLU4 (1-95)
      • expression tag (0)
    Domains in SCOPe 2.07: d5ovaa1, d5ovaa2
  • Chain 'B':
    Compound: SH3 and multiple ankyrin repeat domains protein 3
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Shank3, Prosap2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9JLU4 (1-95)
      • expression tag (0)
    Domains in SCOPe 2.07: d5ovab1, d5ovab2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5ovaA (A:)
svailqkrdhegfgfvlrgakaetpieeftptpafpalqylesvdvegvawkaglrtgdf
lievngvnvvkvghkqvvglirqggnrlvmkvvsvt

    Sequence, based on observed residues (ATOM records): (download) 
    >5ovaA (A:)
svailqkrdhegfgfvlrgapieeftptpafpalqylesvdvegvawkaglrtgdfliev
ngvnvvkvghkqvvglirqggnrlvmkvvsvt

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5ovaB (B:)
svailqkrdhegfgfvlrgakaetpieeftptpafpalqylesvdvegvawkaglrtgdf
lievngvnvvkvghkqvvglirqggnrlvmkvvsvt

    Sequence, based on observed residues (ATOM records): (download) 
    >5ovaB (B:)
svailqkrdhegfgfvlrgpieeftptpafpalqylesvdvegvawkaglrtgdflievn
gvnvvkvghkqvvglirqggnrlvmkvvsvt