PDB entry 5ol2
View 5ol2 on RCSB PDB site
Description: The electron transferring flavoprotein/butyryl-CoA dehydrogenase complex from Clostridium difficile
Class: flavoprotein
Keywords: Flavin based electron bifurcation, Bioenergetics, electron transferring flavoprotein, acyl-CoA dehydrogenase, FLAVOPROTEIN
Deposited on
2017-07-26, released
2017-11-29
The last revision prior to the SCOPe 2.06 freeze date was dated
2017-11-29, with a file datestamp of
2017-11-24.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.12
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Electron transfer flavoprotein large subunit
Species: Clostridioides difficile [TaxId:1496]
Gene: etfA, etfA_4, BN1095_140023, BN1096_550022, BN1097_530021, SAMEA3374989_03962, SAMEA3375004_04103, SAMEA3375059_03747
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Electron transfer flavoprotein small subunit
Species: Clostridioides difficile [TaxId:1496]
Gene: etfB, etfB_3, etfB_4, BN1095_140022, BN1096_550021, BN1097_530020, IM33_05895, SAMEA3374973_01501, SAMEA3374989_03963, SAMEA3375004_04104, SAMEA3375059_03748
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5ol2b_ - Chain 'C':
Compound: acyl-CoA dehydrogenase
Species: Clostridioides difficile [TaxId:1496]
Gene: acdA, bcd, BN1095_140021, BN1096_550020, BN1097_530019, IM33_05890, SAMEA3374973_01502, SAMEA3374989_03964, SAMEA3375004_04105, SAMEA3375059_03749
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5ol2c1, d5ol2c2 - Chain 'D':
Compound: Electron transfer flavoprotein large subunit
Species: Clostridioides difficile [TaxId:1496]
Gene: etfA, etfA_4, BN1095_140023, BN1096_550022, BN1097_530021, SAMEA3374989_03962, SAMEA3375004_04103, SAMEA3375059_03747
Database cross-references and differences (RAF-indexed):
- Chain 'E':
Compound: Electron transfer flavoprotein small subunit
Species: Clostridioides difficile [TaxId:1496]
Gene: etfB, etfB_3, etfB_4, BN1095_140022, BN1096_550021, BN1097_530020, IM33_05895, SAMEA3374973_01501, SAMEA3374989_03963, SAMEA3375004_04104, SAMEA3375059_03748
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5ol2e_ - Chain 'F':
Compound: acyl-CoA dehydrogenase
Species: Clostridioides difficile [TaxId:1496]
Gene: acdA, bcd, BN1095_140021, BN1096_550020, BN1097_530019, IM33_05890, SAMEA3374973_01502, SAMEA3374989_03964, SAMEA3375004_04105, SAMEA3375059_03749
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5ol2f1, d5ol2f2 - Heterogens: FAD, CA, COS
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>5ol2B (B:)
mnivvcikqvpdttevkldpntgtlirdgvpsiinpddkagleeaiklkeemgahvtvit
mgppqadmalkealamgadrgilltdrafagadtwatssalagalknidfdiiiagrqai
dgdtaqvgpqiaehlnlpsityaeeiktegeyvlvkrqfedcchdlkvkmpclittlkdm
ntprymkvgriydafendvvetwtvkdievdpsnlglkgsptsvfksftksvkpagtiyn
edaktsagiiidklkekyii
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>5ol2C (C:)
mdlnskkyqmlkelyvsfaenevkplateldeeerfpyetvekmakagmmgipypkeygg
eggdtvgyimaveelsrvcgttgvilsahtslgswpiyqygneeqkqkflrplasgeklg
afgltepnagtdasgqqttavldgdeyilngskifitnaiagdiyvvmamtdkskgnkgi
safivekgtpgfsfgvkekkmgirgsatselifedcripkenllgkegqgfkiamstldg
grigiaaqalglaqgaldetvkyvkervqfgrplskfqntqfqladmevkvqaarhlvyq
aainkdlgkpygveaamaklfaaetamevttkavqlhggygytrdypvermmrdakitei
yegtsevqrmvisgkllk
- Chain 'D':
No sequence available.
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>5ol2E (E:)
mnivvcikqvpdttevkldpntgtlirdgvpsiinpddkagleeaiklkeemgahvtvit
mgppqadmalkealamgadrgilltdrafagadtwatssalagalknidfdiiiagrqai
dgdtaqvgpqiaehlnlpsityaeeiktegeyvlvkrqfedcchdlkvkmpclittlkdm
ntprymkvgriydafendvvetwtvkdievdpsnlglkgsptsvfksftksvkpagtiyn
edaktsagiiidklkekyii
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>5ol2F (F:)
mdlnskkyqmlkelyvsfaenevkplateldeeerfpyetvekmakagmmgipypkeygg
eggdtvgyimaveelsrvcgttgvilsahtslgswpiyqygneeqkqkflrplasgeklg
afgltepnagtdasgqqttavldgdeyilngskifitnaiagdiyvvmamtdkskgnkgi
safivekgtpgfsfgvkekkmgirgsatselifedcripkenllgkegqgfkiamstldg
grigiaaqalglaqgaldetvkyvkervqfgrplskfqntqfqladmevkvqaarhlvyq
aainkdlgkpygveaamaklfaaetamevttkavqlhggygytrdypvermmrdakitei
yegtsevqrmvisgkllk