PDB entry 5ok4

View 5ok4 on RCSB PDB site
Description: Crystal structure of native [Fe]-hydrogenase Hmd from Methanothermobacter marburgensis inactivated by O2.
Class: oxidoreductase
Keywords: [Fe]-hydrogenase, Fe-Guanylylpyridinol cofactor, H2, hydrogenase, methanogenesis, methenyl-tetrahydromethanopterin, methylene-tetrahydromethanopterin, hydrogenation, O2, inactivation, OXIDOREDUCTASE
Deposited on 2017-07-25, released 2018-05-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-05-30, with a file datestamp of 2018-05-25.
Experiment type: XRAY
Resolution: 1.29 Å
R-factor: N/A
AEROSPACI score: 0.59 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: 5,10-methenyltetrahydromethanopterin hydrogenase
  Species: Methanothermobacter marburgensis str. Marburg [TaxId:79929]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P32440 (0-343)
  Domains in SCOPe 2.08: d5ok4a1, d5ok4a2
• Heterogens: FE, FEG, GOL, HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >5ok4A (A:)
  mklailgagcyrthaasgitnfsracevaemvgkpeiamthstitmgaelkelagvdevv
  vadpvfdnqftviddfayedvieahkedpekimpqirekvnevakelpkppegaihfthp
  edlgfeittddreavadadfimtwfpkgdmqpdiinkfiddikpgaivthactipttkfy
  kifeqkhgdlvtkpetlnvtsyhpgavpemkgqvyiaegyasedaietlfelgqkargna
  yrlpaellgpvcdmcsaltaityagilsyrdsvtqvlgapasfaqmmakesleqitalme
  kvgidkmeenldpgallgtadsmnfgasaeilptvfeilekrkk