PDB entry 5o7d

View 5o7d on RCSB PDB site
Description: The X-ray structure of human R38M phosphoglycerate kinase 1 mutant
Class: transferase
Keywords: transferase
Deposited on 2017-06-08, released 2018-06-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-12-12, with a file datestamp of 2018-12-07.
Experiment type: XRAY
Resolution: 1.84 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphoglycerate kinase 1
    Species: Homo sapiens [TaxId:9606]
    Gene: PGK1, PGKA, MIG10, OK/SW-cl.110
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00558 (Start-416)
      • engineered mutation (38)
    Domains in SCOPe 2.08: d5o7da_
  • Heterogens: ADP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5o7dA (A:)
mslsnkltldkldvkgkrvvmrvdfnvpmknnqitnnqmikaavpsikfcldngaksvvl
mshlgrpdgvpmpdkyslepvavelksllgkdvlflkdcvgpevekacanpaagsville
nlrfhveeegkgkdasgnkvkaepakieafraslsklgdvyvndafgtahrahssmvgvn
lpqkaggflmkkelnyfakalesperpflailggakvadkiqlinnmldkvnemiigggm
aftflkvlnnmeigtslfdeegakivkdlmskaekngvkitlpvdfvtadkfdenaktgq
atvasgipagwmgldcgpesskkyaeavtrakqivwngpvgvfeweafargtkalmdevv
katsrgcitiigggdtatccakwntedkvshvstgggaslellegkvlpgvdalsni

    Sequence, based on observed residues (ATOM records): (download) 
    >5o7dA (A:)
lsnkltldkldvkgkrvvmrvdfnvpmknnqitnnqmikaavpsikfcldngaksvvlms
hlgrpdgvpmpdkyslepvavelksllgkdvlflkdcvgpevekacanpaagsvillenl
rfhveeegkgkdasgnkvkaepakieafraslsklgdvyvndafgtahrahssmvgvnlp
qkaggflmkkelnyfakalesperpflailggakvadkiqlinnmldkvnemiigggmaf
tflkvlnnmeigtslfdeegakivkdlmskaekngvkitlpvdfvtadkfdenaktgqat
vasgipagwmgldcgpesskkyaeavtrakqivwngpvgvfeweafargtkalmdevvka
tsrgcitiigggdtatccakwntedkvshvstgggaslellegkvlpgvdalsni