PDB entry 5o7d

View 5o7d on RCSB PDB site
Description: The X-ray structure of human R38M phosphoglycerate kinase 1 mutant
Class: transferase
Keywords: transferase
Deposited on 2017-06-08, released 2018-06-20
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-06-20, with a file datestamp of 2018-06-15.
Experiment type: XRAY
Resolution: 1.84 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphoglycerate kinase 1
    Species: Homo sapiens [TaxId:9606]
    Gene: PGK1, PGKA, MIG10, OK/SW-cl.110
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00558 (Start-416)
      • engineered mutation (38)
    Domains in SCOPe 2.07: d5o7da_
  • Heterogens: ADP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5o7dA (A:)
    mslsnkltldkldvkgkrvvmrvdfnvpmknnqitnnqmikaavpsikfcldngaksvvl
    mshlgrpdgvpmpdkyslepvavelksllgkdvlflkdcvgpevekacanpaagsville
    nlrfhveeegkgkdasgnkvkaepakieafraslsklgdvyvndafgtahrahssmvgvn
    lpqkaggflmkkelnyfakalesperpflailggakvadkiqlinnmldkvnemiigggm
    aftflkvlnnmeigtslfdeegakivkdlmskaekngvkitlpvdfvtadkfdenaktgq
    atvasgipagwmgldcgpesskkyaeavtrakqivwngpvgvfeweafargtkalmdevv
    katsrgcitiigggdtatccakwntedkvshvstgggaslellegkvlpgvdalsni
    

    Sequence, based on observed residues (ATOM records): (download)
    >5o7dA (A:)
    lsnkltldkldvkgkrvvmrvdfnvpmknnqitnnqmikaavpsikfcldngaksvvlms
    hlgrpdgvpmpdkyslepvavelksllgkdvlflkdcvgpevekacanpaagsvillenl
    rfhveeegkgkdasgnkvkaepakieafraslsklgdvyvndafgtahrahssmvgvnlp
    qkaggflmkkelnyfakalesperpflailggakvadkiqlinnmldkvnemiigggmaf
    tflkvlnnmeigtslfdeegakivkdlmskaekngvkitlpvdfvtadkfdenaktgqat
    vasgipagwmgldcgpesskkyaeavtrakqivwngpvgvfeweafargtkalmdevvka
    tsrgcitiigggdtatccakwntedkvshvstgggaslellegkvlpgvdalsni