PDB entry 5o4f
View 5o4f on RCSB PDB site
Description: Structure of GluK3 ligand-binding domain (S1S2) in complex with the agonist LM-12b at 2.10 A resolution
Class: membrane protein
Keywords: ionotropic glutamate receptor, kainate receptor, ligand-binding domain, gluk3, glur7, agonist, membrane protein
Deposited on
2017-05-29, released
2017-07-26
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-09-27, with a file datestamp of
2017-09-22.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Glutamate receptor ionotropic, kainate 3
Species: Rattus norvegicus [TaxId:10116]
Gene: Grik3, Glur7
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5o4fa_ - Chain 'B':
Compound: Glutamate receptor ionotropic, kainate 3
Species: Rattus norvegicus [TaxId:10116]
Gene: Grik3, Glur7
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5o4fb_ - Heterogens: GOL, 8VE, ZN, CL, ACT, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5o4fA (A:)
gpgtnrslivttlleepfvmfrksdrtlygndrfegycidllkelahilgfsyeirlved
gkygaqddkgqwngmvkelidhkadlavapltithvrekaidfskpfmtlgvsilyrkgt
pidsaddlakqtkieygavkdgatmtffkkskistfekmwafmsskpsalvknneegiqr
tltadyallmesttieyitqrncnltqigglidskgygigtpmgspyrdkitiailqlqe
edklhimkekwwrgsgcp
Sequence, based on observed residues (ATOM records): (download)
>5o4fA (A:)
rslivttlleepfvmfrksdrtlygndrfegycidllkelahilgfsyeirlvedgkyga
qddkgqwngmvkelidhkadlavapltithvrekaidfskpfmtlgvsilyrkpidsadd
lakqtkieygavkdgatmtffkkskistfekmwafmsskpsalvknneegiqrtltadya
llmesttieyitqrncnltqigglidskgygigtpmgspyrdkitiailqlqeedklhim
kekwwrgsgcp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5o4fB (B:)
gpgtnrslivttlleepfvmfrksdrtlygndrfegycidllkelahilgfsyeirlved
gkygaqddkgqwngmvkelidhkadlavapltithvrekaidfskpfmtlgvsilyrkgt
pidsaddlakqtkieygavkdgatmtffkkskistfekmwafmsskpsalvknneegiqr
tltadyallmesttieyitqrncnltqigglidskgygigtpmgspyrdkitiailqlqe
edklhimkekwwrgsgcp
Sequence, based on observed residues (ATOM records): (download)
>5o4fB (B:)
rslivttlleepfvmfrksdrtlygndrfegycidllkelahilgfsyeirlvedgkyga
qddkgqwngmvkelidhkadlavapltithvrekaidfskpfmtlgvsilyrkgtpidsa
ddlakqtkieygavkdgatmtffkkskistfekmwafmsskpsalvknneegiqrtltad
yallmesttieyitqrncnltqigglidskgygigtpmgspyrdkitiailqlqeedklh
imkekwwrgc