PDB entry 5o3x

View 5o3x on RCSB PDB site
Description: Structural characterization of the fast and promiscuous macrocyclase from plant - apo PCY1
Class: hydrolase
Keywords: segetalin biosynthesis, prolyl oligopeptidase, macrocyclase, peptidase, beta-propeller, closed form, hydrolase
Deposited on 2017-05-25, released 2018-02-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-10-16, with a file datestamp of 2019-10-11.
Experiment type: XRAY
Resolution: 2.55 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptide cyclase 1
    Species: Vaccaria hispanica [TaxId:39387]
    Gene: Pcy1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5o3xa1, d5o3xa2
  • Chain 'B':
    Compound: Peptide cyclase 1
    Species: Vaccaria hispanica [TaxId:39387]
    Gene: Pcy1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5o3xb1, d5o3xb2
  • Heterogens: CAC, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5o3xA (A:)
matsgfskplhyppvrrdetvvddyfgvkvadpyrwledpnseetkefvdnqeklansvl
eecelidkfkqkiidfvnfprcgvpfrrankyfhfynsglqaqnvfqmqddldgkpevly
dpnlreggrsglslysvsedakyfafgihsgltewvtikilktedrsylpdtlewvkfsp
aiwthdnkgffycpypplkegedhmtrsavnqearyhflgtdqsedillwrdlenpahhl
kcqitddgkyfllyildgcddankvycldltklpnglesfrgredsapfmklidsfdasy
taiandgsvftfqtnkdaprkklvrvdlnnpsvwtdlvpeskkdllesahavnenqlilr
ylsdvkhvleirdlesgalqhrlpidigsvdgitarrrdsvvffkftsiltpgivyqcdl
kndptqlkifresvvpdfdrsefevkqvfvpskdgtkipifiaarkgisldgshpcemhg
yggfginmmptfsasrivflkhlggvfclanirgggeygeewhkagfrdkkqnvfddfis
aaeylissgytkarrvaieggsnggllvaacinqrpdlfgcaeancgvmdmlrfhkftlg
ylwtgdygcsdkeeefkwlikyspihnvrrpweqpgneetqypatmiltadhddrvvplh
sfkllatmqhvlctsledspqknpiiariqrkaahygratmtqiaevadrygfmakalea
pwid

    Sequence, based on observed residues (ATOM records): (download) 
    >5o3xA (A:)
kplhyppvrrdetvvddyfgvkvadpyrwledpnseetkefvdnqeklansvleecelid
kfkqkiidfvnfprcgvpfrrankyfhfynsglqaqnvfqmqddldgkpevlydpnlreg
grsglslysvsedakyfafgihsgltewvtikilktedrsylpdtlewvkfspaiwthdn
kgffycpypplkegedhmtrsavnqearyhflgtdqsedillwrdlenpahhlkcqitdd
gkyfllyildgcddankvycldltklpnglesfrdsapfmklidsfdasytaiandgsvf
tfqtnkdaprkklvrvdlnnpsvwtdlvpeskkdllesahavnenqlilrylsdvkhvle
irdlesgalqhrlpidigsvdgitarrrdsvvffkftsiltpgivyqcdlkndptqlkif
resvvpdfdrsefevkqvfvpskdgtkipifiaarkgisldgshpcemhgyggfginmmp
tfsasrivflkhlggvfclanirgggeygeewhkagfrdkkqnvfddfisaaeylissgy
tkarrvaieggsnggllvaacinqrpdlfgcaeancgvmdmlrfhkftlgylwtgdygcs
dkeeefkwlikyspihnvrrpweqpgneetqypatmiltadhddrvvplhsfkllatmqh
vlctsledspqknpiiariqrkaahygratmtqiaevadrygfmakaleapwid

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5o3xB (B:)
matsgfskplhyppvrrdetvvddyfgvkvadpyrwledpnseetkefvdnqeklansvl
eecelidkfkqkiidfvnfprcgvpfrrankyfhfynsglqaqnvfqmqddldgkpevly
dpnlreggrsglslysvsedakyfafgihsgltewvtikilktedrsylpdtlewvkfsp
aiwthdnkgffycpypplkegedhmtrsavnqearyhflgtdqsedillwrdlenpahhl
kcqitddgkyfllyildgcddankvycldltklpnglesfrgredsapfmklidsfdasy
taiandgsvftfqtnkdaprkklvrvdlnnpsvwtdlvpeskkdllesahavnenqlilr
ylsdvkhvleirdlesgalqhrlpidigsvdgitarrrdsvvffkftsiltpgivyqcdl
kndptqlkifresvvpdfdrsefevkqvfvpskdgtkipifiaarkgisldgshpcemhg
yggfginmmptfsasrivflkhlggvfclanirgggeygeewhkagfrdkkqnvfddfis
aaeylissgytkarrvaieggsnggllvaacinqrpdlfgcaeancgvmdmlrfhkftlg
ylwtgdygcsdkeeefkwlikyspihnvrrpweqpgneetqypatmiltadhddrvvplh
sfkllatmqhvlctsledspqknpiiariqrkaahygratmtqiaevadrygfmakalea
pwid

    Sequence, based on observed residues (ATOM records): (download) 
    >5o3xB (B:)
gfskplhyppvrrdetvvddyfgvkvadpyrwledpnseetkefvdnqeklansvleece
lidkfkqkiidfvnfprcgvpfrrankyfhfynsglqaqnvfqmqddldgkpevlydpnl
reggrsglslysvsedakyfafgihsgltewvtikilktedrsylpdtlewvkfspaiwt
hdnkgffycpyppsavnqearyhflgtdqsedillwrdlenpahhlkcqitddgkyflly
ildgcddankvycldltklpnglesfrgredsapfmklidsfdasytaiandgsvftfqt
nkdaprkklvrvdlnnpsvwtdlvpeskkdllesahavnenqlilrylsdvkhvleirdl
esgalqhrlpidigsvdgitarrrdsvvffkftsiltpgivyqcdlkndptqlkifresv
vpdfdrsefevkqvfvpskdgtkipifiaarkgisldgshpcemhgyggfginmmptfsa
srivflkhlggvfclanirgggeygeewhkagfrdkkqnvfddfisaaeylissgytkar
rvaieggsnggllvaacinqrpdlfgcaeancgvmdmlrfhkftlgylwtgdygcsdkee
efkwlikyspihnvrrpweqpgneetqypatmiltadhddrvvplhsfkllatmqhvlct
sledspqknpiiariqrkaratmtqiaevadrygfmakaleapwid