PDB entry 5nv7
View 5nv7 on RCSB PDB site
Description: Human DNMT3B PWWP domain in complex with N1-(2-hydroxyethyl)-2-methyl-1,2-propanediamine
Class: transferase
Keywords: dnmt3b pwwp domain, histone binding, beta barrel, ligand, transferase
Deposited on
2017-05-03, released
2018-05-30
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-10-16, with a file datestamp of
2019-10-11.
Experiment type: XRAY
Resolution: 2.57 Å
R-factor: N/A
AEROSPACI score: 0.2
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA (cytosine-5)-methyltransferase 3B
Species: Homo sapiens [TaxId:9606]
Gene: Dnmt3b
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5nv7a_ - Chain 'B':
Compound: DNA (cytosine-5)-methyltransferase 3B
Species: Homo sapiens [TaxId:9606]
Gene: Dnmt3b
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5nv7b_ - Heterogens: 9AK, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5nv7A (A:)
eadsgdgdsseyqdgkefgigdlvwgkikgfswwpamvvswkatskrqamsgmrwvqwfg
dgkfsevsadklvalglfsqhfnlatfnklvsyrkamyhalekarvragktfpsspgdsl
edqlkpmlewahggfkptgieglkpnntqp
Sequence, based on observed residues (ATOM records): (download)
>5nv7A (A:)
seyqdgkefgigdlvwgkikgfswwpamvvswkatskrqamsgmrwvqwfgdgkfsevsa
dklvalglfsqhfnlatfnklvsyrkamyhalekarvragktfpsledqlkpmlewahgg
fkptgieglkpn
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5nv7B (B:)
eadsgdgdsseyqdgkefgigdlvwgkikgfswwpamvvswkatskrqamsgmrwvqwfg
dgkfsevsadklvalglfsqhfnlatfnklvsyrkamyhalekarvragktfpsspgdsl
edqlkpmlewahggfkptgieglkpnntqp
Sequence, based on observed residues (ATOM records): (download)
>5nv7B (B:)
eyqdgkefgigdlvwgkikgfswwpamvvswkatskrqamsgmrwvqwfgdgkfsevsad
klvalglfsqhfnlatfnklvsyrkamyhalekarvragktfpledqlkpmlewahggfk
ptgieglkpn