PDB entry 5nt7
View 5nt7 on RCSB PDB site
Description: Structure of the LOTUS domain of Oskar in complex with the C-terminal RecA-like domain of Vasa
Class: hydrolase/hydrolase regulator
Keywords: DEAD-box RNA helicase, ATPase, RNA binding, regulator, stimulator, germ plasm, nuage, LOTUS, hydrolase- hydrolase regulator complex, hydrolase-hydrolase regulator complex
Deposited on
2017-04-27, released
2017-05-17
The last revision prior to the SCOPe 2.06 freeze date was dated
2017-05-17, with a file datestamp of
2017-05-12.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: N/A
AEROSPACI score: 0.54
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: maternal effect protein oskar
Species: Drosophila melanogaster [TaxId:7227]
Gene: osk, CG10901
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: ATP-dependent RNA helicase vasa, isoform A
Species: Drosophila melanogaster [TaxId:7227]
Gene: vas, vasa, CG46283
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5nt7b_ - Chain 'C':
Compound: maternal effect protein oskar
Species: Drosophila melanogaster [TaxId:7227]
Gene: osk, CG10901
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: ATP-dependent RNA helicase vasa, isoform A
Species: Drosophila melanogaster [TaxId:7227]
Gene: vas, vasa, CG46283
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5nt7d_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5nt7B (B:)
ghsdvkqtiyevnkyakrsklieilseqadgtivfvetkrgadflasflsekefpttsih
gdrlqsqreqalrdfkngsmkvliatsvasrgldiknikhvinydmpskiddyvhrigrt
grvgnngratsffdpekdraiaadlvkilegsgqtvpdflrtc
Sequence, based on observed residues (ATOM records): (download)
>5nt7B (B:)
vkqtiyevnkyakrsklieilseqadgtivfvetkrgadflasflsekefpttsihgdrl
qsqreqalrdfkngsmkvliatsvasrgldiknikhvinydmpskiddyvhrigrtgrat
sffdpekdraiaadlvkilegsgqtvpdflrtc
- Chain 'C':
No sequence available.
- Chain 'D':
Sequence, based on SEQRES records: (download)
>5nt7D (D:)
ghsdvkqtiyevnkyakrsklieilseqadgtivfvetkrgadflasflsekefpttsih
gdrlqsqreqalrdfkngsmkvliatsvasrgldiknikhvinydmpskiddyvhrigrt
grvgnngratsffdpekdraiaadlvkilegsgqtvpdflrtc
Sequence, based on observed residues (ATOM records): (download)
>5nt7D (D:)
vkqtiyevnkyakrsklieilseqadgtivfvetkrgadflasflsekefpttsihgdrl
qsqreqalrdfkngsmkvliatsvasrgldiknikhvinydmpskiddyvhrigrtgrat
sffdpekdraiaadlvkilegsgqtvpdflrtc