PDB entry 5nqq

View 5nqq on RCSB PDB site
Description: Rabbit Muscle L-lactate dehydrogenase in complex with NADH and oxaloacetate
Class: oxidoreductase
Keywords: oxaloacetate, oxidoreductase
Deposited on 2017-04-20, released 2017-06-07
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-07-19, with a file datestamp of 2017-07-14.
Experiment type: XRAY
Resolution: 1.87 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: L-lactate dehydrogenase A chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Gene: LDHA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13491 (Start-331)
      • engineered mutation (248)
    Domains in SCOPe 2.07: d5nqqa1, d5nqqa2
  • Chain 'B':
    Compound: L-lactate dehydrogenase A chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Gene: LDHA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13491 (Start-331)
      • engineered mutation (248)
    Domains in SCOPe 2.07: d5nqqb1, d5nqqb2
  • Chain 'C':
    Compound: L-lactate dehydrogenase A chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Gene: LDHA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13491 (Start-331)
      • engineered mutation (248)
    Domains in SCOPe 2.07: d5nqqc1, d5nqqc2
  • Chain 'D':
    Compound: L-lactate dehydrogenase A chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Gene: LDHA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13491 (Start-331)
      • engineered mutation (248)
    Domains in SCOPe 2.07: d5nqqd1, d5nqqd2
  • Heterogens: NAI, SO4, OAA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5nqqA (A:)
maalkdqlihnllkeehvpqnkitvvgvgavgmacaisilmkdladelalvdvmedklkg
emmdlqhgslflrtpkivsgkdysvtansklviitagarqqegesrlnlvqrnvnifkfi
ipnvvkysphckllvvsnpvdiltyvawkisgfpknrvigsgcnldsarfrylmgerlgv
halschgwilgehgdssvpvwsgmnvagvslktlhpelgtdadkeqwkqvhkqvvdsaye
viklkgytswaiglsvadlaesimknlrrvhpistmlkglygikedvflsvpcvlgqngi
sdvvkvtltseeeahlkksadtlwgiqkelqf

    Sequence, based on observed residues (ATOM records): (download) 
    >5nqqA (A:)
aalkdqlihnllkeehvpqnkitvvgvgavgmacaisilmkdladelalvdvmedklkge
mmdlqhgslflrtpkivsgkdysvtansklviitagarqqegesrlnlvqrnvnifkfii
pnvvkysphckllvvsnpvdiltyvawkisgfpknrvigsgcnldsarfrylmgerlgvh
alschgwilgehgdssvpvwsgmnvagvslktlhpelgtdadkeqwkqvhkqvvdsayev
iklkgytswaiglsvadlaesimknlrrvhpistmlkglygikedvflsvpcvlgqngis
dvvkvtltseeeahlkksadtlwgiqkelqf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5nqqB (B:)
maalkdqlihnllkeehvpqnkitvvgvgavgmacaisilmkdladelalvdvmedklkg
emmdlqhgslflrtpkivsgkdysvtansklviitagarqqegesrlnlvqrnvnifkfi
ipnvvkysphckllvvsnpvdiltyvawkisgfpknrvigsgcnldsarfrylmgerlgv
halschgwilgehgdssvpvwsgmnvagvslktlhpelgtdadkeqwkqvhkqvvdsaye
viklkgytswaiglsvadlaesimknlrrvhpistmlkglygikedvflsvpcvlgqngi
sdvvkvtltseeeahlkksadtlwgiqkelqf

    Sequence, based on observed residues (ATOM records): (download) 
    >5nqqB (B:)
aalkdqlihnllkeehvpqnkitvvgvgavgmacaisilmkdladelalvdvmedklkge
mmdlqhgslflrtpkivsgkdysvtansklviitagarqqegesrlnlvqrnvnifkfii
pnvvkysphckllvvsnpvdiltyvawkisgfpknrvigsgcnldsarfrylmgerlgvh
alschgwilgehgdssvpvwsgmnvagvslktlhpelgtdadkeqwkqvhkqvvdsayev
iklkgytswaiglsvadlaesimknlrrvhpistmlkglygikedvflsvpcvlgqngis
dvvkvtltseeeahlkksadtlwgiqkelqf

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5nqqC (C:)
maalkdqlihnllkeehvpqnkitvvgvgavgmacaisilmkdladelalvdvmedklkg
emmdlqhgslflrtpkivsgkdysvtansklviitagarqqegesrlnlvqrnvnifkfi
ipnvvkysphckllvvsnpvdiltyvawkisgfpknrvigsgcnldsarfrylmgerlgv
halschgwilgehgdssvpvwsgmnvagvslktlhpelgtdadkeqwkqvhkqvvdsaye
viklkgytswaiglsvadlaesimknlrrvhpistmlkglygikedvflsvpcvlgqngi
sdvvkvtltseeeahlkksadtlwgiqkelqf

    Sequence, based on observed residues (ATOM records): (download) 
    >5nqqC (C:)
aalkdqlihnllkeehvpqnkitvvgvgavgmacaisilmkdladelalvdvmedklkge
mmdlqhgslflrtpkivsgkdysvtansklviitagarqqegesrlnlvqrnvnifkfii
pnvvkysphckllvvsnpvdiltyvawkisgfpknrvigsgcnldsarfrylmgerlgvh
alschgwilgehgdssvpvwsgmnvagvslktlhpelgtdadkeqwkqvhkqvvdsayev
iklkgytswaiglsvadlaesimknlrrvhpistmlkglygikedvflsvpcvlgqngis
dvvkvtltseeeahlkksadtlwgiqkelqf

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5nqqD (D:)
maalkdqlihnllkeehvpqnkitvvgvgavgmacaisilmkdladelalvdvmedklkg
emmdlqhgslflrtpkivsgkdysvtansklviitagarqqegesrlnlvqrnvnifkfi
ipnvvkysphckllvvsnpvdiltyvawkisgfpknrvigsgcnldsarfrylmgerlgv
halschgwilgehgdssvpvwsgmnvagvslktlhpelgtdadkeqwkqvhkqvvdsaye
viklkgytswaiglsvadlaesimknlrrvhpistmlkglygikedvflsvpcvlgqngi
sdvvkvtltseeeahlkksadtlwgiqkelqf

    Sequence, based on observed residues (ATOM records): (download) 
    >5nqqD (D:)
aalkdqlihnllkeehvpqnkitvvgvgavgmacaisilmkdladelalvdvmedklkge
mmdlqhgslflrtpkivsgkdysvtansklviitagarqqegesrlnlvqrnvnifkfii
pnvvkysphckllvvsnpvdiltyvawkisgfpknrvigsgcnldsarfrylmgerlgvh
alschgwilgehgdssvpvwsgmnvagvslktlhpelgtdadkeqwkqvhkqvvdsayev
iklkgytswaiglsvadlaesimknlrrvhpistmlkglygikedvflsvpcvlgqngis
dvvkvtltseeeahlkksadtlwgiqkelqf