PDB entry 5nli
View 5nli on RCSB PDB site
Description: Crystal structure of Zn2-E16V human ubiquitin (hUb) mutant adduct, from a solution 35 mM zinc acetate/10% v/v TFE/1.3 mM E16V hUb
Class: ligase
Keywords: E16V mutant, ligase, ubiquitination, proteasome degradation
Deposited on
2017-04-04, released
2017-05-03
The last revision prior to the SCOPe 2.06 freeze date was dated
2017-05-03, with a file datestamp of
2017-04-28.
Experiment type: XRAY
Resolution: 1.53 Å
R-factor: N/A
AEROSPACI score: 0.48
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Polyubiquitin-C
Species: Homo sapiens [TaxId:9606]
Gene: UBC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5nlia_ - Chain 'B':
Compound: Polyubiquitin-C
Species: Homo sapiens [TaxId:9606]
Gene: UBC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5nlib_ - Chain 'C':
Compound: Polyubiquitin-C
Species: Homo sapiens [TaxId:9606]
Gene: UBC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5nlic_ - Heterogens: ACT, ZN, EDO, ETF, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5nliA (A:)
mqifvktltgktitlvvepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>5nliA (A:)
mqifvktltgktitlvvepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlr
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5nliB (B:)
mqifvktltgktitlvvepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>5nliB (B:)
mqifvktltgktitlvvepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlr
- Chain 'C':
Sequence, based on SEQRES records: (download)
>5nliC (C:)
mqifvktltgktitlvvepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>5nliC (C:)
mqifvktltgktitlvvepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlr