PDB entry 5ni3
View 5ni3 on RCSB PDB site
Description: sfGFP 204-204 mutant dimer
Class: fluorescent protein
Keywords: GFP, super folder, click chemistry, SPAAC, artificial dimers, fluorescent protein
Deposited on
2017-03-23, released
2018-09-12
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-12-02, with a file datestamp of
2020-11-27.
Experiment type: XRAY
Resolution: 1.28 Å
R-factor: N/A
AEROSPACI score: 0.68
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Green fluorescent protein
Species: Aequorea victoria [TaxId:6100]
Gene: GFP
Database cross-references and differences (RAF-indexed):
- Uniprot A0A059PIQ0 (0-226)
- conflict (27)
- chromophore (63)
- conflict (69)
- conflict (77)
- engineered mutation (201)
- conflict (203)
Domains in SCOPe 2.08: d5ni3a_ - Chain 'B':
Compound: Green fluorescent protein
Species: Aequorea victoria [TaxId:6100]
Gene: GFP
Database cross-references and differences (RAF-indexed):
- Uniprot A0A059PIQ0 (0-230)
- conflict (27)
- chromophore (63)
- conflict (69)
- conflict (77)
- engineered mutation (201)
- conflict (203)
Domains in SCOPe 2.08: d5ni3b_ - Chain 'C':
Compound: Green fluorescent protein
Species: Aequorea victoria [TaxId:6100]
Gene: GFP
Database cross-references and differences (RAF-indexed):
- Uniprot A0A059PIQ0 (0-230)
- conflict (27)
- chromophore (63)
- conflict (69)
- conflict (77)
- conflict (201)
- conflict (203)
Domains in SCOPe 2.08: d5ni3c_ - Chain 'D':
Compound: Green fluorescent protein
Species: Aequorea victoria [TaxId:6100]
Gene: GFP
Database cross-references and differences (RAF-indexed):
- Uniprot A0A059PIQ0 (0-End)
- conflict (27)
- chromophore (63)
- conflict (69)
- conflict (77)
- conflict (201)
- conflict (203)
Domains in SCOPe 2.08: d5ni3d_ - Heterogens: NA, DB5, GOL, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>5ni3A (A:)
kgeelftgvvpilveldgdvnghkfsvrgegegdatngkltlkficttgklpvpwptlvt
tlgygvqcfsrypdhmkrhdffksampegyvqertisfkddgtyktraevkfegdtlvnr
ielkgidfkedgnilghkleynfnshnvyitadkqkngikanfkirhnvedgsvqladhy
qqntpigdgpvllpdnhylstfsvlskdpnekrdhmvllefvtaagi
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>5ni3B (B:)
kgeelftgvvpilveldgdvnghkfsvrgegegdatngkltlkficttgklpvpwptlvt
tlgygvqcfsrypdhmkrhdffksampegyvqertisfkddgtyktraevkfegdtlvnr
ielkgidfkedgnilghkleynfnshnvyitadkqkngikanfkirhnvedgsvqladhy
qqntpigdgpvllpdnhylstfsvlskdpnekrdhmvllefvtaagithgm
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>5ni3C (C:)
kgeelftgvvpilveldgdvnghkfsvrgegegdatngkltlkficttgklpvpwptlvt
tlgygvqcfsrypdhmkrhdffksampegyvqertisfkddgtyktraevkfegdtlvnr
ielkgidfkedgnilghkleynfnshnvyitadkqkngikanfkirhnvedgsvqladhy
qqntpigdgpvllpdnhylstksvlskdpnekrdhmvllefvtaagithgm
- Chain 'D':
Sequence, based on SEQRES records: (download)
>5ni3D (D:)
kgeelftgvvpilveldgdvnghkfsvrgegegdatngkltlkficttgklpvpwptlvt
tlgygvqcfsrypdhmkrhdffksampegyvqertisfkddgtyktraevkfegdtlvnr
ielkgidfkedgnilghkleynfnshnvyitadkqkngikanfkirhnvedgsvqladhy
qqntpigdgpvllpdnhylstksvlskdpnekrdhmvllefvtaagithgm
Sequence, based on observed residues (ATOM records): (download)
>5ni3D (D:)
kgeelftgvvpilveldgdvnghkfsvrgegegdatngkltlkficttgklpvpwptlvt
tlgygvqcfsrypdhmkrhdffksampegyvqertisfkddgtyktraevkfegdtlvnr
ielkgidfkedgnilghkleynfnshnvyitadkqkngikanfkirhnvedgsvqladhy
qqntpigdgpvllpdnhylstksvlskdpnekrdhmvllefvtaagi