PDB entry 5nf6
View 5nf6 on RCSB PDB site
Description: Structure of GluK3 ligand-binding domain (S1S2) in complex with CIP-AS at 2.55 A resolution
Class: membrane protein
Keywords: ionotropic glutamate receptor, kainate receptor, ligand-binding domain, gluk3, glur7, agonist, membrane protein
Deposited on
2017-03-13, released
2017-07-26
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-09-27, with a file datestamp of
2017-09-22.
Experiment type: XRAY
Resolution: 2.55 Å
R-factor: N/A
AEROSPACI score: 0.21
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Glutamate receptor ionotropic, kainate 3,Glutamate receptor ionotropic, kainate 3
Species: Rattus norvegicus [TaxId:10116]
Gene: Grik3, Glur7
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5nf6a_ - Chain 'B':
Compound: Glutamate receptor ionotropic, kainate 3,Glutamate receptor ionotropic, kainate 3
Species: Rattus norvegicus [TaxId:10116]
Gene: Grik3, Glur7
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5nf6b_ - Heterogens: ZN, 8VN, ACT, GOL, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5nf6A (A:)
gpgtnrslivttlleepfvmfrksdrtlygndrfegycidllkelahilgfsyeirlved
gkygaqddkgqwngmvkelidhkadlavapltithvrekaidfskpfmtlgvsilyrkgt
pidsaddlakqtkieygavkdgatmtffkkskistfekmwafmsskpsalvknneegiqr
tltadyallmesttieyitqrncnltqigglidskgygigtpmgspyrdkitiailqlqe
edklhimkekwwrgsgcp
Sequence, based on observed residues (ATOM records): (download)
>5nf6A (A:)
nrslivttlleepfvmfrksdrtlygndrfegycidllkelahilgfsyeirlvedgkyg
aqddkgqwngmvkelidhkadlavapltithvrekaidfskpfmtlgvsilyrkgtpids
addlakqtkieygavkdgatmtffkkskistfekmwafmsskpsalvknneegiqrtlta
dyallmesttieyitqrncnltqigglidskgygigtpmgspyrdkitiailqlqeedkl
himkekwwrgsgcp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5nf6B (B:)
gpgtnrslivttlleepfvmfrksdrtlygndrfegycidllkelahilgfsyeirlved
gkygaqddkgqwngmvkelidhkadlavapltithvrekaidfskpfmtlgvsilyrkgt
pidsaddlakqtkieygavkdgatmtffkkskistfekmwafmsskpsalvknneegiqr
tltadyallmesttieyitqrncnltqigglidskgygigtpmgspyrdkitiailqlqe
edklhimkekwwrgsgcp
Sequence, based on observed residues (ATOM records): (download)
>5nf6B (B:)
rslivttlleepfvmfrksdrtlygndrfegycidllkelahilgfsyeirlvedgkyga
qddkgqwngmvkelidhkadlavapltithvrekaidfskpfmtlgvsilyrkgtpidsa
ddlakqtkieygavkdgatmtffkkskistfekmwafmsskpsalvknneegiqrtltad
yallmesttieyitqrncnltqigglidskgygigtpmgspyrdkitiailqlqeedklh
imkekwwrgsgc